Gene TDE0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0007 
Symbol 
ID2741622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp10014 
End bp10868 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content34% 
IMG OID637158876 
Producthypothetical protein 
Protein accessionNP_970624 
Protein GI42525526 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAT TGTTTAAAAT AACTTTACGC AACGACTACG CTTTTAAGCG TATATTCGGA 
GTAGAAGAAA ACAAGGACGT TCTTCAGGAT TTGTTGGAAT GTATACTGGA TATTCCGCCT
GAGAATATCG CAGGTTTGGA ACTTCTGGAT AAGGAGTTTC ATAAGGAACT TTTAAGTGAA
AAGCTAGGTA TTTTGGATAT CAAGTTAAGG CTAAAAGACG GAACCTTTGT CGACATTGAA
ATTCAGAACA ACTGGCATTT TGATTTTCCT GAAAGAACCT TATATTATTG GTCTAAAATG
TACAACGAAG CTATAAAACA AGGCCAAGAC TATACAAATC TTCCAAAATG TATTACAATA
AATTTGATAG GAAAAGGCTT TGATAAAAAT AAGCGTTTAC ATAACAAGTA TCTTGTTCTG
GAAAAAGATA CAAAAGAGCC TTTAGCTTCA AAACTTGAGA TTCATATATT AAACCTTGAA
AAGGCAAGAC TCTTAAAAGA AGGCCAATTT AAAGATAATA AAACAAAACG CTTATTAAGC
TGGTTGAAAT TTATCGAAAC TGATAATCCG GAGGTGCGGG AAATGTTAGA ACAAGAATCG
ACAATGATGA AAAAAGCAAA TGCCGCTATT TCTGTAATGG AAATGAGTCC TAGAGATAAA
TGGCTTTATG ACTCTCGAAT GAAATATGAA CATGACAGAG CTTCATGTAT AAGCGAAGGC
TATCGACAAG GTCTTGATAA AGGGGCTTAC CAAAATAAAC TTGAAACGGC AAAGTTGATG
AAAAAGATGA ATTATCCGAT TAGTGATATT TGCACAATAT CCGGCCTTAC CAAAGAAGAA
ATTGAAAAAC TATAA
 
Protein sequence
MQKLFKITLR NDYAFKRIFG VEENKDVLQD LLECILDIPP ENIAGLELLD KEFHKELLSE 
KLGILDIKLR LKDGTFVDIE IQNNWHFDFP ERTLYYWSKM YNEAIKQGQD YTNLPKCITI
NLIGKGFDKN KRLHNKYLVL EKDTKEPLAS KLEIHILNLE KARLLKEGQF KDNKTKRLLS
WLKFIETDNP EVREMLEQES TMMKKANAAI SVMEMSPRDK WLYDSRMKYE HDRASCISEG
YRQGLDKGAY QNKLETAKLM KKMNYPISDI CTISGLTKEE IEKL