Gene TDE0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0003 
Symbol 
ID2741617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp3623 
End bp4342 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content42% 
IMG OID637158872 
Producthypothetical protein 
Protein accessionNP_970620 
Protein GI42525522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATG TTAATAGTTC TGTGCTCTTT TGGTTTGCAG GTATTGTGAT ACTCTTTGTT 
TTAATTCAGT CCGTCTTCTT TTTGATAAAG GCTTTGAGGC GGGCAAAAGA GCTCAATATG 
TCCCAAAAAA AAATAAAGCA AATTATCTCC GGAGCAGCGA TTTTTACGGT TGCACCCGCC 
ATTTCAATCA TTTTAGGCAT GATAAGCCTT TCCAAATTTT TAGGACTTCC CCTGCCTTGG 
CTCCGCCTTT CGGTACTGGG AGCCTTAACC TATGAGCTTA CTGCGGCAAG CACAGCTGCT 
TCCGTTTTAG ACATTCCCTT GGATGAGCCG ATTGCAAATG CAACAGCCTA TACGACTATT 
TCTTGGGTTA TGGCCCTCGG AATAATTTCG GGGATTGTCG TGATTGCTCT TTTTCTGCCA 
AAGATGCAAA AAAATCTTAT TAAGATGAAG TCCAAGGATG AAAAATGGAG TAAGCTCCTC 
ATCGATGCCC TTTTTATGGG AATGATTTCC GCCTTTTTAG GAATGATATT TTCTGAAATC 
AGGCTCGGGC TTAAGGGTTG GATTCCCGTT TTTGTGATGT TTTTTTCAGC CTTTTTAATG 
CTTGTCTGCG GTTTAGTCGT AAAAAAGACA AGGGCTAAGT GGCTTGAAAG CTATGCTATG 
CCGATAAGCC TTTTGGGAGG GATGGCTTTT TCCATTCCGA TTACCATGTT GATAGCTTAA
 
Protein sequence
MFDVNSSVLF WFAGIVILFV LIQSVFFLIK ALRRAKELNM SQKKIKQIIS GAAIFTVAPA 
ISIILGMISL SKFLGLPLPW LRLSVLGALT YELTAASTAA SVLDIPLDEP IANATAYTTI 
SWVMALGIIS GIVVIALFLP KMQKNLIKMK SKDEKWSKLL IDALFMGMIS AFLGMIFSEI 
RLGLKGWIPV FVMFFSAFLM LVCGLVVKKT RAKWLESYAM PISLLGGMAF SIPITMLIA