| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2187 |
|---|
| Symbol | menA |
|---|
| ID | 2552023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 2293846 |
|---|
| End bp | 2294733 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637150755 |
|---|
| Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| Protein accession | NP_906235 |
|---|
| Protein GI | 34541756 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| TIGRFAM ID | [TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA ACGGATCACC CCCGCGTCTC AAAGCTTGGC TCGCTTTGCT ACGGCCTCAT
ACCCTGCCGG CATCTGTCAG TCCTGTCGTT GTAGCCATTG CTTATGCTAT AGCTGACGGC
AATTTTCGCT GGCCACAGGC CGCTTTGGCT TTGATCGTAG CGGTGTCTGC CCAAACGGTC
AGCAATATAG CCAACGATTG GTTCGACTAT AAGAAGGGTG CGGATACCGA TCAGCGTGTA
GGCTTTGAAC GTGGGATCTC CAAAGGTTGG TTGTCGGAGC GACAGGTTCT CGCAGCTCTT
TTCTCATTTC TTTTTCTGCT CGGCTTTAGC GGTTTTCTGC TTTGTGCCAT TAGCAACTGG
TGGTTGCTGG TCGTGGGAGT CGTTGTAGCC ATTGGAGCTT TGTCGTATAG TGCCGGTCCT
TATCCTTTGG CCTATCATGG ATTGGGCGAA ATCGCAGTCT TCATTTTTTT CGGTCTGATC
CCTGTCCTCT TCACCTATTA CGTTCAGGCC GAAAGTTTCC CCTCCGATCT TTGGCATTTG
GGCGCGGCGA TGGGATTTGC CGGAGTCAAT ATCCTCATCG TGAACAACTA TCGGGACTAT
GAAGAAGACC GCAAGAGTGG CAAGCGTACG ATCCTCGTAA AGAAAGGACG CGACCTCGGT
CCGAAACTCT ATCTCGCCTG CGGTCTGCTT TCCATGATGG TACTTTATCC TTTCTTTTCG
GCCGGCGGTT TGCTGCTTCT GCTGCTTTAT CTTGCTTTTT TCATGACCAA TTACCGCCGT
CTTCTTCGAG AGGAGGGTAC GGCGCTGAAC GCGCTTCTTG TCCGTACGGC AAAGGCCATT
TCTCTTTTGG CTCTCGTTGC GATAGCCATG CTTTTCCTTG CTCGATAA
|
|---|
| Protein sequence | MSNNGSPPRL KAWLALLRPH TLPASVSPVV VAIAYAIADG NFRWPQAALA LIVAVSAQTV
SNIANDWFDY KKGADTDQRV GFERGISKGW LSERQVLAAL FSFLFLLGFS GFLLCAISNW
WLLVVGVVVA IGALSYSAGP YPLAYHGLGE IAVFIFFGLI PVLFTYYVQA ESFPSDLWHL
GAAMGFAGVN ILIVNNYRDY EEDRKSGKRT ILVKKGRDLG PKLYLACGLL SMMVLYPFFS
AGGLLLLLLY LAFFMTNYRR LLREEGTALN ALLVRTAKAI SLLALVAIAM LFLAR
|
|---|
| |