Gene PG2117 details

Gene Information

• Locus tag: PG2117
• Symbol: rpsP
• ID: 2552452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 2225325
• End bp: 2225903
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637150693
• Product: 30S ribosomal protein S16
• Protein accession: NP_906175
• Protein GI: 34541696
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0228] Ribosomal protein S16
• TIGRFAM ID: [TIGR00002] ribosomal protein S16

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.595697
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAACAA AAATCAGATT GCAACGACAT GGTCGCAAAG GTTATGCCTT TTATAAGATC 
GTTGTCGCAG ACAGCAGGGC GCCACGAGAT GGCAAGTTTA TTGAAAGGAT CGGTTCATAC 
AATCCGAACA CGAATCCTGC TACAATAGAT TTGAATTTCG AGCGCGCTTT GTATTGGATC 
GGTGTAGGCG CACAGCCTAC CGACACGGCA CGTAATATTT TGTCCCGTGA GGGTGTGCTC 
ATGATGAAGC ACCTCCTTGG TGGTGTTAAG AAGGGTGCTT TCGATCAAGC TGCAGCAGAA 
AACAAGTTCG AGGCTTGGTT GAAGGGCAAA AAAGATGCTC TTAACAACAT GAAGGCAAAG 
GTGAAAGAAG CCGCTGTAGC GGACGATAAG GTTAAGCTCG AAGCAGAGAA GGCCGTAAAC 
AAGGCTCGTG CAGAAGCTGT GGCAGAGAAA AAAGCCGCAG AGGCCAAAGC TAAGGCTGAA 
GCAGAGGCTG CTGCCGCTGC CGAAGAAGCT GCCGAAACGG AAGAAACTCC CGTGGAAGCT 
GCTGCCGAAG AAGCTCCTGC TGCTGAGAGC GCAGAATAA 

 

Protein sequence

MATKIRLQRH GRKGYAFYKI VVADSRAPRD GKFIERIGSY NPNTNPATID LNFERALYWI 
GVGAQPTDTA RNILSREGVL MMKHLLGGVK KGAFDQAAAE NKFEAWLKGK KDALNNMKAK 
VKEAAVADDK VKLEAEKAVN KARAEAVAEK KAAEAKAKAE AEAAAAAEEA AETEETPVEA 
AAEEAPAAES AE