Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG2015 |
Symbol | cas4 |
ID | 2553095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 2105592 |
End bp | 2106104 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637150593 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | NP_906083 |
Protein GI | 34541604 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAA TATCAGGCAC GCACTTCAAC TATCATCAGG TTTGTCGGAG AAAGCTATGG CTTTTCTCTG CAGGTATTAC GATGGAGCAT ACATCTGATT TAGTATACGA GGGGAAATTG ATCCATGAGA CAACGTACCA GCAACGACCG GAGCGATACC AAGAATTGGA GTTGGACGGC ATCAAGATAG ACTTTTATGA CGCAAAAAAC AGAGTGGTTC ACGAGGTCAA AAAGTCTAAC AAAATATCGC CTGCCCACAG ACTCCAACTA CTCTATTACT TATATGTATT GGAGCGTAAT GGGGTATTGG GAGCAACGGG GATATTGGAG TATCCGACTC TACGAAAAAA GGAAGAAGTG ATTCTTTCTG ACATAGATCG CGAACGGATC AGAGAGATCG AGCAGGAGAT CCTACAGATT ATCAGTCACG AGGATTGTCC TCCTGTTATC GACTCCGGGA TCTGTAAAAA CTGTAGCTAT TACGAATTCT GCTTCTCGGG AGAAGAGCAA TGA
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Protein sequence | MNTISGTHFN YHQVCRRKLW LFSAGITMEH TSDLVYEGKL IHETTYQQRP ERYQELELDG IKIDFYDAKN RVVHEVKKSN KISPAHRLQL LYYLYVLERN GVLGATGILE YPTLRKKEEV ILSDIDRERI REIEQEILQI ISHEDCPPVI DSGICKNCSY YEFCFSGEEQ
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