Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1996 |
Symbol | deoC |
ID | 2553165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 2086061 |
End bp | 2086930 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637150578 |
Product | deoxyribose-phosphate aldolase |
Protein accession | NP_906068 |
Protein GI | 34541589 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.734647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAA ATAAATACGA AATGGCCTTC GCTCAGTTCG ATCCGGCCGA GTCAGAAGAG AGAATTTTAC TGAAAACCGA TCAAATAATA CGGGATCACT ATTCACGATT CGACACTCCG GAAACGAAGA AATTCCTGCA TGGCGTCATC GATCTGACCA GCCTGAACGC CACGGATTCG GAGGAGTCCA TCACAAAGTT TACCGAGAGC GTCAATGACT TCGAGGACAC AGATCCCACG ATTCCATCCG TAGCGGCGAT CTGCGTATAC CCCAACTTCG TCTCCACCGT GAGAGAAACG CTCACAGCCG AAAACGTGAA AGTGGCCAGC GTCAGTGGCT GTTTCCCCGC TTCACAGAGC TTTATCGAAG TTAAGTTGGC CGAAACGGCA CTGGCCGTAA GCGATGGAGC AGATGAAATA GACATAGTAC TCAATATGGG TAAGTTCCTA AGTGGGGACT ATGAAGCAGC GGCCACGGAA ATCGAAGAGC AAATAGCAGC AGCAAAGGGA GCTACCGTCA AAGTGATACT GGAGACAGGC GCATTGAAAA CACCGGAGAA TATCCGTCGC GCTACGATTC TCTCCCTTTT CTGCGGTGCA CATTTTGTAA AGACATCCAC AGGCAAAGGC TACCCCGGAG CGAGCCTTGA AGCAGCCTAT ACGATGTGCA AGGTGCTGAA ACAGTACTAC GGACTTTTTG GCGAAGTACG TGGTATCAAA CTGTCCGGAG GCATTCGCAC AACTGAAGAT GCTGTGAAAT ACTACTGTCT GATCGAAACG CTTTTGGGCA AAGAATGGCT TACGCCGGCA TATTTCCGCA TAGGAGCCAG CAGCTTGGTG GACGCCCTCC GGCAGGATAT TATGGTCTAA
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Protein sequence | MAANKYEMAF AQFDPAESEE RILLKTDQII RDHYSRFDTP ETKKFLHGVI DLTSLNATDS EESITKFTES VNDFEDTDPT IPSVAAICVY PNFVSTVRET LTAENVKVAS VSGCFPASQS FIEVKLAETA LAVSDGADEI DIVLNMGKFL SGDYEAAATE IEEQIAAAKG ATVKVILETG ALKTPENIRR ATILSLFCGA HFVKTSTGKG YPGASLEAAY TMCKVLKQYY GLFGEVRGIK LSGGIRTTED AVKYYCLIET LLGKEWLTPA YFRIGASSLV DALRQDIMV
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