Gene PG1884 details

Gene Information

• Locus tag: PG1884
• ID: 2551741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1979058
• End bp: 1981082
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637150479
• Product: alpha-L-fucosidase precursor, putative
• Protein accession: NP_905969
• Protein GI: 34541490
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3669] Alpha-L-fucosidase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCTCAAC GACATTCGGA AGCCTTCGAG CGTTGGCATC GTGACAAATT CAGCCTTTTC 
ATTCATTACG GCCTCTACAG TGAGCTTGGA GGGGTTTGGC AAGGCAAACC AGTGAAGAAC 
GGATATAGCG AACAGATCTA CTCTTTCGGA ATACGCGACA TGAAGCAATA CGAGCCGGTG 
GCCAAGCGGT TCCGCCCCGA CAGATGGGAT GCCGATGCCA TAGTAGCCTT AGCTCGGAAA 
GCAGGGATGA AGAGTATCGT GTTTACTTCC AAGCATCACG ATGGCTTCTG CATGTATGGC 
TCGGCTGAGA CTCCATTCAA TATAGTGGAG GCCACTCCTT CGCGTCGCGA TGTGATGAAG 
GAATTGAGCG ATGCTTGTGA GCGTTCGGGT ATGAAGTTCG GCGTTTACTT CTCTCTTATT 
GATTGGCATT TCCCGGAAGC CAATCCGATC AGCGATCACA ATGCTGATCG GATTACTCCG 
GCACATCACC AATACAATAT GCGTCAGGTC AGAGAGATCC TCACGGGCTA CGGCCCTGTC 
AGCGAGTTGT GGTTCGATAT GGGATCGCTT ACGCCGAAGC AGAGTGAAGA GTTGTATTGT 
TTGGTGCATG AGCTACAGCC CGATTGTATG GTTAGCGGAC GCTTAGGTAA TGACCGAGCG 
GACTTTGCCG TCATGGGAGA CAATGAACTT CCTACCGAAC CGATTGCCAT TCCTTGGCAG 
ACGGCGGCAT CTATGTTCCC TGAGACATGG GGCTATCGCT CATGGCAGGA GAGAGGCTCT 
ATTCGGGACA AAGCTCGCGA GAAGTTCGAA GATTTGGTGC GAGTGGTGTG TCGTGGGGGT 
AATTATCTGC TGAACATCGG TCCTGAAGGC AATGGCTCCA TATTGCCTTA TGAATCCGAA 
GTGCTGCGAA CCATGGGCGA ATTTCTCGAT ATGTATGGAG AAGGTATTTA CGGTACGGAA 
CGCTCTCCTT TTCCTGAACT CTTGCCCTTT GGCGAAGTTT CGGTTCGTGA TTCCATGCTT 
TATCTGTTTG TTCGTCCGGA TATGGCCGGC AAGGAGGTAT TCATTCCGGT GAATGGAGAA 
TTTTTGGAGG AGGTGAGCAA TTTGACCAAC GCTTCACCGC TCAATATGGA CATTCGCAAG 
ACGGGGGTTC GTATCCGAAT GCCTGCAAGT ATGCCTGAGT CTTTTCTTGT GCTGGCTTTG 
GCTTTTGACA GAAACGATTT TGTACTCGCA GGCCGACCTC AAGGCTATCC CCTGCATATG 
GCCAATAGCT CTCGGATATA CGGCCATAGC TGCTGGGACT ACTATACGGG CTTCAAGAGT 
ATAACGGGCA TGAAGTGGCA AGCGGTTTCT GCTCCGCGTG CTATTATATA TACGGACATG 
GAAGCCGGCA AGACACTACG GCTTTCTGTC GGGAGGGAGG AACGAGAAAT TACATTGGAA 
GGAGGCAAAT CAGAGGAAGT ATCGATTTCG CACGACGGCT TGTCATGGGG CAAACCCTAT 
GTTCGGCAAG TGGGTGGGGT ATTCGGTATG ATTCCAGACA ATATCCTTCG AGGCGACTCC 
ATCCCTCTAC CCTTAACCAA AGGGTGGGAA GAAATGCCTG TAGGACAAGT GGAGAAAAAG 
CCTTGGGGAG AGATTAGCTC CTGTCTGCTG GTGCAGGATA TTGTATCGGA TAGAGAACAG 
ACCGTGGCAT GCCACCTGAC TTTCGGCAAT GGCATATATG TAACACTCAA TGGGAAACAA 
ATCACAGCCG AACTGATTCG GGAGACAGGC CTGGCTCATG AACTAACCGT TTGCTTGCCG 
TTGCAAAAAG GGAAAAATCG ATTGGCTGTG AAGTTTATGA ATAGATTCGG GGAAGAATTG 
ATAAGAGGTG TCAGCTGGCC GAAGTCATAT ACACGCTACT TGCTGCCCAT TGAAGGGTTT 
TCATTGGAGA AAGTCGGGAA AAAGGGGATT CCCATCGAAC TCCGTCCTGC ATCCGTTCGG 
TATCAGGGTG CATCTGCTTC GATTCCGAAT ATAGCCCTCC TTTGA 

 

Protein sequence

MAQRHSEAFE RWHRDKFSLF IHYGLYSELG GVWQGKPVKN GYSEQIYSFG IRDMKQYEPV 
AKRFRPDRWD ADAIVALARK AGMKSIVFTS KHHDGFCMYG SAETPFNIVE ATPSRRDVMK 
ELSDACERSG MKFGVYFSLI DWHFPEANPI SDHNADRITP AHHQYNMRQV REILTGYGPV 
SELWFDMGSL TPKQSEELYC LVHELQPDCM VSGRLGNDRA DFAVMGDNEL PTEPIAIPWQ 
TAASMFPETW GYRSWQERGS IRDKAREKFE DLVRVVCRGG NYLLNIGPEG NGSILPYESE 
VLRTMGEFLD MYGEGIYGTE RSPFPELLPF GEVSVRDSML YLFVRPDMAG KEVFIPVNGE 
FLEEVSNLTN ASPLNMDIRK TGVRIRMPAS MPESFLVLAL AFDRNDFVLA GRPQGYPLHM 
ANSSRIYGHS CWDYYTGFKS ITGMKWQAVS APRAIIYTDM EAGKTLRLSV GREEREITLE 
GGKSEEVSIS HDGLSWGKPY VRQVGGVFGM IPDNILRGDS IPLPLTKGWE EMPVGQVEKK 
PWGEISSCLL VQDIVSDREQ TVACHLTFGN GIYVTLNGKQ ITAELIRETG LAHELTVCLP 
LQKGKNRLAV KFMNRFGEEL IRGVSWPKSY TRYLLPIEGF SLEKVGKKGI PIELRPASVR 
YQGASASIPN IALL