| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1855 |
|---|
| Symbol | |
|---|
| ID | 2551827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1953932 |
|---|
| End bp | 1955566 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637150455 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | NP_905945 |
|---|
| Protein GI | 34541466 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT CATCCGGTTC CGGCAGCACC CTCTCATACA TCCTTATCGC TGCCATCTTC
AGCGCCGTTG GTGCTCTTGC CTCACATTTC TATTTCACTC ACAAGAATCC GAGCGATCTG
AATGAAGTGT TGAATCTGAT CGACAGAAAC TATGTCGATT CGGTAGATGT GCGGAAGTTG
CAGCACAATA TGATTCCCTA TCTGCTGGAG CAGCTCGACC CTCACTCCGT ATTCCTTAGC
AAGGCCGACA ACGCCGAGGA AGCTGCCACG CTTAGCGGCG GATTCTGTGG TATCGGCGTT
TCTTTCAATA CACTGCTGGA TACTATCGTG GTTACGCAGA TCGTACCGGG AGGCCCGTCC
GATCGTGCAG GTATCCGAGC CGGCGACCGT TTGCTTCAGG CCGGATCGCA GAAACTGTAC
GGCAAGGGTG TCGATATGAA CACCATCGAC GATGTGCTTC GTGGAGAAAA GGGGTCGGTG
GTCAATATCC TGATACGGCG CAATGGAAAG GAATCGGTGC ATCGGGTGGT ACGAGACGAT
GTTCCTCTGC CCTCGCTCAA TGCTTTTTAC CTGATAGAAC CCTCCATAGC CTACGTGCGA
ATCGATTCTT GGACAGGTAC CACACATGCG GAGTTCATAG AAGCCTTGGG ACGTTTGCGC
AAGAAAGGGG CTACGAGCCT TATCCTCGAT CTGCGAGAAA ATCGGGGCGG TTTGCTGGAG
CCGGCTATTG CCATGGCCAA TGAATTTTTG GGTAAGAATC TCCCCATTCT TCAGATCGAA
GGCAAAGCGT ATCCGCGTGA GGAGATTTCG TCCGATGGCA AAGGTATCTT GCAGCAAATT
CCTCTGGTAG TGCTGGTGGA TGAGTTCTCG GCAAGCAGCA GCGAGGTATT TACCGGTGCC
ATGCAAGACC ATGACCGCGC TCAAATCATC GGTCGCCGGA CGTTCGGCAA GGGACTGGTG
CAACTGCCGT TCGATTTGGC AGATGGTTCT GCCATCCGCC TGACCGTAGC ACGCTATTAT
ACGCCATCGG GACGCTCCAT TCAGAAGCCG TATTCTTCCG GCGTAGATGA AAATTACTAT
CAGGATCTGA GGAATCGCTT CAATCACGGA GAGCTATACT CGGCCGACAG CATACCTTCA
CTGGGAGGAA AGATATTCAA GACAGCCGGT GGCCGCGAAG TCTATGGTGG CGGTGGCATC
ATACCGGATA TTTTTATCCC ACTGGATACA GCCGGTCTTA ATTCCTATAT GATGAAAGTG
GAGGATTCGG ATTTGATCCC TCGCTATGCT TTCCTGTACA GCGATGCGAA CAGGGTTTCC
TTGAGTCGTT TTAAGACAGT CGAGGAGTTG GGAGCTTATC TGGATCGTAC TTATCTGATT
TTCGACTTTG CTTCTTTTGC CCAGCGTTAC GGTATCCCGA TGCGTACTTC TTTAATCAAC
GAAGCTCGCA ACCGCATAAA AAAATATATC AATGCATACA TTGCGATGAA TTTCTTCGAT
CTGCAGGGGT ATTATCAATT GCTGCTGCAT GATGATCCTT TTATCCTCCA AGCCATTTCT
CTCATCAAAG AGGGCAAAAC TTTTCCATTG ATTTATGACC AAAAAGGAAC TCAGAGCACA
GATCCGGCAG CGTAA
|
|---|
| Protein sequence | MKRSSGSGST LSYILIAAIF SAVGALASHF YFTHKNPSDL NEVLNLIDRN YVDSVDVRKL
QHNMIPYLLE QLDPHSVFLS KADNAEEAAT LSGGFCGIGV SFNTLLDTIV VTQIVPGGPS
DRAGIRAGDR LLQAGSQKLY GKGVDMNTID DVLRGEKGSV VNILIRRNGK ESVHRVVRDD
VPLPSLNAFY LIEPSIAYVR IDSWTGTTHA EFIEALGRLR KKGATSLILD LRENRGGLLE
PAIAMANEFL GKNLPILQIE GKAYPREEIS SDGKGILQQI PLVVLVDEFS ASSSEVFTGA
MQDHDRAQII GRRTFGKGLV QLPFDLADGS AIRLTVARYY TPSGRSIQKP YSSGVDENYY
QDLRNRFNHG ELYSADSIPS LGGKIFKTAG GREVYGGGGI IPDIFIPLDT AGLNSYMMKV
EDSDLIPRYA FLYSDANRVS LSRFKTVEEL GAYLDRTYLI FDFASFAQRY GIPMRTSLIN
EARNRIKKYI NAYIAMNFFD LQGYYQLLLH DDPFILQAIS LIKEGKTFPL IYDQKGTQST
DPAA
|
|---|
| |