Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1808 |
Symbol | spoT |
ID | 2552271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1903045 |
End bp | 1905333 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637150416 |
Product | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |
Protein accession | NP_905907 |
Protein GI | 34541428 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAAG ACGCGAGTGC AAAGAATCCC GATATAGAGA CAGAAAATAA GGGGGCGATC AGCGAAGAGG AAGCTTTGAT TCAGAGGGAA TACTCTTTGT TGATTCAAGA CTATTTGAAT TCCAACCATC GTCGCAAAGT GGAAAAGATC GACAAGGCTT TCCACTTGGC CAAGGATGCT CATGCCGGTG CCAAGCGACG TAGCGGTGAG CCGTATATTC TCCATCCTAT TGCCGTGGCA CGGATTGTGT GCCAGGAAAT AGGCTTGGGA TCTACGTCCA TCTGTTGTGC TCTGCTGCAC GATGTGGTGG AGGATACGGA GTACACCGTG GAAGATATGC GCGATATGTT CGGCGACAAG GTCGCTCAGA TCGTGGACGG GCTGACCAAA ATATCCGGCG AGGTATTCAG CAATAGTTCC GCCCAAGCCG AAAATTTCCG CAAGCTTATC CTGACGATGA ATGATGACAT CCGCGTTATC CTCATCAAGA TTGCCGATCG CTTGCATAAT ATGCGCACAC TGGACTCCAT GCTTCCGGCC AAGCAAATGA AGATAGCAGG TGAGACACAG TATGTCTATG CTCCCTTGGC ACATCGTTTG GGTCTCTTCG CCATCAAGAG CGAGTTGGAA GATTTGAGCT TCAAATACGA GCATCCACAG GAATATGAAG CCATCAAGGA GAAAATCCGC ATCACCGAGC AGCATCGTTT AGAGATGTTC GAGCATTTTG CGGCACCGCT CAAACAACGG TTTGCCGGTA TGGACATGTC CTATGAGATG AAGGCGAGGG TCAAATCCGT CTATTCCATT TGGAAGAAAA TGGAAAAGAA AGGAGTTCCT TTCGAAGAGA TTTACGACCT TTTTGCGGTA CGAATCATAT TCGAATCTTC ACCCACCATC CCCGACAAAA ACCGCTGCTG GGAGATCTAT TCGGCCATCA CGGATATATA TCGCAATCGT CCCGACCGTA TTCGCGACTG GGTCAGCAAT CCTAAAAGCA ACGGATACCA AGCACTCCAC CTGACGGTCA TGGGACCGGA TGGCGAGTGG GTAGAAGTCC AAATCCGTAG CCGAAGGATG GACGACATAG CAGAGAAAGG ATTTGCTGCC CACTGGAAAT ACAAGGGAGA CAACGTGGAG GAAGATTCGG AGCTGGAGAA ATGGCTCAGT ACCATACAGG AGATACTGGA AAATCCGAAT CCGAATGCTC TTGATTTTCT CGATACGATC AAACTGAATC TATTCTCCAA TGAGGTAATG GTGTTCACGC CAAAAGGCGA AATTAAACGT TTGCCTCAGG GAGCTACGGC TTTGGACTTT GCTTATTCGC TTCACTCTGA TTTGGGAGAC CATTGCATCG GGGCCAAAGT GAATCACAAA CTCGTTCCGC TCAGTTATGT GCTCAACAGC GGTGATCAGG TGGAGGTACT TTCGAGCAAA AGCCAGCAAC CGACCGAAGA GTGGTTGCGC TATGTGACTA CGGCACGAGC CAAATCGAAA GTAGATACTT TTCTCCGACG CAAAAGACGG GAGCTGATCA ATCGTGGGGA AGAACGAGTG GTCAGTGTTA TACGGACATC CGAATCCATG GTCTCTGCCG AGCTTTTGGA TAGGATCGCA GCCTATTTCG GTTTCCTCAA TCGCGAAACA TTCTTCTACG CCGTCGGTAC GGGTACGGTA TCTCTGCCCG AAAGCTTCAA AAAACTGCTT CAGGGAGAAC ATAGCGGTAA CTTTCTGATG AGGGCTATCC GTTCGGCATT GAAAGCGGGC AAAAGCAACA AAACCTCCTC TCCATCCGGT AAGCCCGCAG AGAAAGAGGA TAAGAAAGCT TACAACACCA AAAAGACTTA TATCCTACAA GAGGACGAAT TCTCCCGTAA CTATCAGATT GCCGAATGCT GCAAACCGAT TCCGGGCGAC GATGCTTTCG GATTTATCAA CGACGATAAT ACTGTGGTCG TACACAAGCG ATCTTGCCCC ATTGCCATGC GTTTGAAAAG CAGCTTTGGC AACCGCATCC TCTCTACCGA ATGGAGCTTG CACAGTCGTA CCTCGTTCGA AGCTAAGCTC GCACTCAAGG GCATTGACTC CACCGGTATC CTCACCGCTG TGACACAGGT TATTTCGGAA GATTTCAATG TCGGCATCAA GCACATACAG CTTACGGCCA AAGATGGCAT TTTCGAGGGA CAAATCCATC TGCTTGTGCA CAGCTCCGAC GACCTCCTGA AGATCTGTCA TCAGCTTCGT CAGAATAAAT ACATCCAGTC TGTCGGACGC ATATCATAA
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Protein sequence | MEQDASAKNP DIETENKGAI SEEEALIQRE YSLLIQDYLN SNHRRKVEKI DKAFHLAKDA HAGAKRRSGE PYILHPIAVA RIVCQEIGLG STSICCALLH DVVEDTEYTV EDMRDMFGDK VAQIVDGLTK ISGEVFSNSS AQAENFRKLI LTMNDDIRVI LIKIADRLHN MRTLDSMLPA KQMKIAGETQ YVYAPLAHRL GLFAIKSELE DLSFKYEHPQ EYEAIKEKIR ITEQHRLEMF EHFAAPLKQR FAGMDMSYEM KARVKSVYSI WKKMEKKGVP FEEIYDLFAV RIIFESSPTI PDKNRCWEIY SAITDIYRNR PDRIRDWVSN PKSNGYQALH LTVMGPDGEW VEVQIRSRRM DDIAEKGFAA HWKYKGDNVE EDSELEKWLS TIQEILENPN PNALDFLDTI KLNLFSNEVM VFTPKGEIKR LPQGATALDF AYSLHSDLGD HCIGAKVNHK LVPLSYVLNS GDQVEVLSSK SQQPTEEWLR YVTTARAKSK VDTFLRRKRR ELINRGEERV VSVIRTSESM VSAELLDRIA AYFGFLNRET FFYAVGTGTV SLPESFKKLL QGEHSGNFLM RAIRSALKAG KSNKTSSPSG KPAEKEDKKA YNTKKTYILQ EDEFSRNYQI AECCKPIPGD DAFGFINDDN TVVVHKRSCP IAMRLKSSFG NRILSTEWSL HSRTSFEAKL ALKGIDSTGI LTAVTQVISE DFNVGIKHIQ LTAKDGIFEG QIHLLVHSSD DLLKICHQLR QNKYIQSVGR IS
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