| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1794 |
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| Symbol | polA |
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| ID | 2552230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1886118 |
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| End bp | 1888898 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637150404 |
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| Product | DNA polymerase type I |
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| Protein accession | NP_905895 |
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| Protein GI | 34541416 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC GACTTTTCCT TCTTGATGCT TATGCTCTCA TCTTTCGTGC CTATTATGCT
TTCATCCGTA GTCCGCGGAT CGACTCTACC GGTCGTGACA CCGGAGCTGT ATTCGGCTTT
GCCCTGACCT TATTGGATAT ACTGGAGAAG GAGTCGCCGG AGCATATCGC CGTGGTATTC
GATCCTCCGG GAGGTAGTTT TCGTCATCGC GAGTATGCAG AGTACAAGGC TCAACGAGAG
GAAACGCCGG AAGGTATTCG CATCGCCGTT CCGTTGATTA AAGAGATATT GGCAGCTTTC
CGTATTCCTG CTGTAGAAGT GCCGGACTTT GAAGCAGACG ACACGATAGG TACTTTGGCC
AAACAAGCCG AAGAGCAAGG GCTTGCCGTC AGAATGGTAA CGCCCGATAA GGATTTCGGC
CAACTGGTGT CGGAGCGAAT CAAGATCTAT CGACCCAAGT CGGGTGGTGG CTATGAAACA
TGGGGGCCGG CAGAAGTCTG CGAAAAGTTC GGACTTTCCA TCCCCGGGCA AATGATAGAT
TACCTCGGCC TCGTGGGAGA CAGCTCGGAC AATATACCCG GATGTAAAGG CATTGGAGCG
AAAACAGCTG AGAAGCTACT GGCCGAGTAT GGAAGCATAG ACGGCATATA CGCCCACCAA
GATGAATTGA AAGGAGCTGT GGCCAAGAAA ATTCAGGAGG GGGAAGAGCA AACGCGCTTC
TCGCGCTACT TGGCCACTAT CCGCACGGAT GCTCCTATTG TCTTCGATTC CGAAGCCTAT
CGACGTACTT CGCCCGATAT GGCAGCCGTT CGTGAATGCT TTGCTGCACT GGAATTTCGC
ACTTTGCTGA AACGGTTGGA GAGTACACCT ACCGATGCCC CTGCGACAGA CCTGTTTGCC
GGCATGGTAC AGGCACAAGA GCCTCCGACA GATTTGTTCG GAGAAGGCAC CGATGCTACA
GGACTTCCGC TAAAGAAACT GACAGACGTA CCACACGAAT ATACGATTCT CAAAACCGAG
GAAGAGATAG CGGATTGCAT CCGAATGTTC TCTGCCACGC CTTGTTTCTC ATTCGACACA
GAGACCGACT CGAAAGATGC ACTTCGGGCC AATATCGTTG CCATCACGCT ATGTGCCGAG
TCGGGACGGG CTTTCTTCAT ACCGCTGCCG GAAGACGAAG AAATCGGAAA ACGCAGATTA
GATCTCTTGC GTCCGCTTTT TGCCGATACA GCTATCGGCA AAGTCGGTCA GAATATGAAG
TATGATATCC AAGTACTCTC CCGATATGGT ATAGAAGTAC GCGGACAGCT ATTCGATACG
ATGATAGCAC ACTACCTCCT CTTTCCCGAT CTCCGCCACA ATATGGATGA GATGGCGGAG
ACGTTGCTGG GCTATTGCAC CGTCCACTAC TCGGATCTTG TCGGAAGCGA CAAACAGGAG
GTGCACATCC GTCAGGTACC ATTGCAGAAT CTGGCAGACT ATGCCATGGA AGACGCCGAT
ATTACTTGGC AGCTATATGA ACGCCTCAAT GCTATGCTCT CCGAGGCCGG GATGACCTCC
TTATTCGAAA GTATAGAGAT GCCACTCGTG CCGGTGCTTG CCAATATGGA ACGCTCCGGC
GTAAAGCTGG ACACGGAGGT GCTCCGACGC ACAGCTTCCG GACTTGGCGA AGAGATGCAG
CGAATCGAAG ATGAAATCTA CCGTTTGGCC GGACACTCAT TCAATATCAA CAGTCCCTCT
CAAGTGGGAA CCGTGCTCTT CGAGGAACTG CAAATTACCG AAAAGCCCAA AAAGACGAAG
TCCGGCAGCT ACTCTACAAA CGAAGAAATT CTGGTCAAGC TACAGGAAAA ACATCCCATC
GTGCGTCTCA TACTGGACTA TAGAGGAATC AAAAAACTAC TCAGTACCTA TGTAGAAGCT
CTGCCGGAGA TGCGCTACCC CGATGGTAAG CTGCATACCT CGTTCAATCA GACCGTCGCT
ACCACGGGAC GTCTCTCCAG CAGCAATCCT AATCTGCAAA ACATTCCGAT CCGGACCGAA
GTCGGGAGGG GGCTGAGGGC TGCTTTCGTA CCGGACAATG ACGAATGTAT TTTCATGAGC
GCAGACTATT CTCAGATCGA GCTGCGGCTG ATGGCGCATC TGAGTGAAGA CGAGAGCTTG
ATACAGGCTT TTCTCCATGG GGAAGACATC CACCGAGCCA CAGCCTCCAA AATATACAGG
CTGCCTCTTG TAGAAGTCAC GGATGACATG CGCCGCCGAG CTAAAACGGC CAACTTCGGG
ATCATCTACG GCATCTCTGC TTTCGGGCTT AGCGAACGGC TCAATATCTC CCGTACAGAA
GCCAAGGCCT TGATCGAAGG TTACTTTGCC TCTTACCCGG GGGTTAAAGC GTATATGGAT
CGGAGTATTG CCGAAGCCAA GCGACAGGGC TACGTCACCA CACTGTTCGG TCGCAAGCGA
TTCCTCCGGG ATATAAACAG TGCCAATGCC GTCGTCCGCG GCTATGCAGA GCGGAATGCC
ATCAATGCCC CTATACAAGG CTCTGCTGCC GACCTGATCA AGCTGGCGAT GATCAGAATA
CACGAGGAAA TCACTGAGCG TAAGCTGCGG AGCCGAATGA TCCTGCAAGT GCACGACGAA
CTCAACTTCA ACGTTCTTCG TCCTGAAGCT GCAGAAGTTC GCGAGCTTGT ACGCTCGTGT
ATGGAGGGGG TGATGCCCTC TTTGCGTGTT CCTCTGATAG CCGAGATCGG CGAAGGAGCC
AATTGGCTGG AGGCGCACTG A
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| Protein sequence | MTERLFLLDA YALIFRAYYA FIRSPRIDST GRDTGAVFGF ALTLLDILEK ESPEHIAVVF
DPPGGSFRHR EYAEYKAQRE ETPEGIRIAV PLIKEILAAF RIPAVEVPDF EADDTIGTLA
KQAEEQGLAV RMVTPDKDFG QLVSERIKIY RPKSGGGYET WGPAEVCEKF GLSIPGQMID
YLGLVGDSSD NIPGCKGIGA KTAEKLLAEY GSIDGIYAHQ DELKGAVAKK IQEGEEQTRF
SRYLATIRTD APIVFDSEAY RRTSPDMAAV RECFAALEFR TLLKRLESTP TDAPATDLFA
GMVQAQEPPT DLFGEGTDAT GLPLKKLTDV PHEYTILKTE EEIADCIRMF SATPCFSFDT
ETDSKDALRA NIVAITLCAE SGRAFFIPLP EDEEIGKRRL DLLRPLFADT AIGKVGQNMK
YDIQVLSRYG IEVRGQLFDT MIAHYLLFPD LRHNMDEMAE TLLGYCTVHY SDLVGSDKQE
VHIRQVPLQN LADYAMEDAD ITWQLYERLN AMLSEAGMTS LFESIEMPLV PVLANMERSG
VKLDTEVLRR TASGLGEEMQ RIEDEIYRLA GHSFNINSPS QVGTVLFEEL QITEKPKKTK
SGSYSTNEEI LVKLQEKHPI VRLILDYRGI KKLLSTYVEA LPEMRYPDGK LHTSFNQTVA
TTGRLSSSNP NLQNIPIRTE VGRGLRAAFV PDNDECIFMS ADYSQIELRL MAHLSEDESL
IQAFLHGEDI HRATASKIYR LPLVEVTDDM RRRAKTANFG IIYGISAFGL SERLNISRTE
AKALIEGYFA SYPGVKAYMD RSIAEAKRQG YVTTLFGRKR FLRDINSANA VVRGYAERNA
INAPIQGSAA DLIKLAMIRI HEEITERKLR SRMILQVHDE LNFNVLRPEA AEVRELVRSC
MEGVMPSLRV PLIAEIGEGA NWLEAH
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