Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1780 |
Symbol | bioF-3 |
ID | 2552390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1868926 |
End bp | 1870113 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637150389 |
Product | 8-amino-7-oxononanoate synthase |
Protein accession | NP_905882 |
Protein GI | 34541403 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAT TGTTACAGGA TAAATTGGCT CAGTATACCG AGCCGCAAAA GGCACAAGCC GCAGGTATTT ACCCTTATTT CAGAAAAATC GAAAGTGATC AGGATACCGA GGTCGTTATC GATGGTCGGA AAGTCCTCAT GTTCGGCTCC AATGCATATC TGGGACTGAC GAACCACCCG AAAGTCAAGG AGGCAGCTAT CGAAGCGACA AAGAAGTACG GTACGGGCTG TGCCGGCTCC CGCTTCCTCA ACGGCACACT CGATATTCAC CTCGAACTGG AAAAACGGCT GGCCGAGTTC GTCGGCAAGG AAGATGCCAT CAGCTTCTCT ACCGGCTTCC AAGTGAATCT GGGCGTTGTC TCCTGCATCA CCGGCCGCGA GGATTATATC ATCTGGGACG AGTTGGATCA TGCTTCGATC ATCGAGGGTA TTCGCCTTTC ATTCAGCACG AAGTTAAAGT ACAAGCATAA TGATATGGGT TCTCTGGAGA AGCGGCTCCA GCAGTGCGAC CCGGAGAAGA TCAAACTGAT TGTGGTCGAT GGTGTCTTCA GTATGGAGGG TGATGTCTGC AATCTGCCCG AAATCGTTCG CCTCGCCAAG CGATACAACG CCAATGTGAT GGTGGACGAA GCTCACGGTA TCGGCGTGAT GGGCGACCAC GGACGCGGCG TCTGCAATCA CTTCGGTCTG ACCGACGAAG TGGACTTGAT CATGGGTACT TTCAGCAAAT CTTTCGCTTC GCTCGGAGGG TTTATTGCAG GAGACAAGAG CGTTATCAAC TACCTGCGCC ACCACGCCCG ATCCTATATT TTCAGTGCCA GCTGTACGCC GGCCTCTACG GCAGCGGCAG CAGCTGCTCT GGACATTATG TTTAGCGAAC CGGAGCGTTT AGCCCGATTG TGGGAGCTGA CGCACTACTC ATTGAACGCA TTCCGCAGTC TTGGATTCGA AATAGGTCAT ACATCGACAC CTATTATCCC GCTTTTTATC CGCAACAACG AGAAGACATT CCAAATAACC CGAGACGCTT TCGAAGAAGG GGTATTCGTC AATCCGGTGG TCTCTCCGGC GGTAGCTCCG TCCGACACCC TTATTCGCTT TTCACTCATG GCTACGCATA CGAAGGAGCA ACTCGACTTT GCCATCGAAA AGCTGCATAA GGTATTCAAG CAGAACGGTG TCCTGTAA
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Protein sequence | MGKLLQDKLA QYTEPQKAQA AGIYPYFRKI ESDQDTEVVI DGRKVLMFGS NAYLGLTNHP KVKEAAIEAT KKYGTGCAGS RFLNGTLDIH LELEKRLAEF VGKEDAISFS TGFQVNLGVV SCITGREDYI IWDELDHASI IEGIRLSFST KLKYKHNDMG SLEKRLQQCD PEKIKLIVVD GVFSMEGDVC NLPEIVRLAK RYNANVMVDE AHGIGVMGDH GRGVCNHFGL TDEVDLIMGT FSKSFASLGG FIAGDKSVIN YLRHHARSYI FSASCTPAST AAAAAALDIM FSEPERLARL WELTHYSLNA FRSLGFEIGH TSTPIIPLFI RNNEKTFQIT RDAFEEGVFV NPVVSPAVAP SDTLIRFSLM ATHTKEQLDF AIEKLHKVFK QNGVL
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