Gene PG1714 details

Gene Information

• Locus tag: PG1714
• Symbol: pdxH
• ID: 2552531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1801938
• End bp: 1802582
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637150329
• Product: pyridoxamine-phosphate oxidase
• Protein accession: NP_905824
• Protein GI: 34541345
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0259] Pyridoxamine-phosphate oxidase
• TIGRFAM ID: [TIGR00558] pyridoxamine-phosphate oxidase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATTTAC ATTTCGAAAA TATCAGGCGG GAATATGACA AACGAAGCCT TTCCGCCAGC 
GACCTGACAC CTACTCCTTT CGACCTTGTC ACCAGATGGT TGCAAGATGC GGTCGAAGCC 
AAAACATATG AGCCTACAGC CGTTATCGTC GGGACGGCTA CTCCTGACGG TCATCCCAGT 
ACGCGAACCG TTTTGCTCAA GGAGTTTATG AACAACGAAT TTATCTTCTA CAGCAACTAT 
GAGAGTCGCA AGGGGCAGCA AATGGCTGCC AATCCGCACG TCTGTCTCAC ATTCCTCTGG 
CACGAACTGG AGCGTCAGAT ACATGTGGAG GGGGATGTAC GTATTTTAGA GCCGGAGCTT 
AGCGATGCTT ATTTTGCTAC ACGTCCGTAC AAAAGTCGGG TAGGGGCGCG CATTTCGCCA 
CAGAGTCGTC CTATACCGGG GCGTTCTTTC ATCGTACAGG AATTCATGAA GGAGTCGCTC 
AAATATGCCG GTCGGACTGT GCCACGTCCT GACACTTGGG GTGGCTTTGC CGTGAAGCCG 
GTACGAATAG AATTTTGGCA AGGGCGCGAA AGCCGCTTGC ACGATCGCTT CCTGTACGAA 
CTCCGGCCCG ATGCTTCCTG GTCTGTTCAC CGCTTGGCTC CGTAA 

 

Protein sequence

MDLHFENIRR EYDKRSLSAS DLTPTPFDLV TRWLQDAVEA KTYEPTAVIV GTATPDGHPS 
TRTVLLKEFM NNEFIFYSNY ESRKGQQMAA NPHVCLTFLW HELERQIHVE GDVRILEPEL 
SDAYFATRPY KSRVGARISP QSRPIPGRSF IVQEFMKESL KYAGRTVPRP DTWGGFAVKP 
VRIEFWQGRE SRLHDRFLYE LRPDASWSVH RLAP