Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1702 |
Symbol | gyrB |
ID | 2552582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1788036 |
End bp | 1790000 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637150319 |
Product | DNA gyrase, B subunit |
Protein accession | NP_905814 |
Protein GI | 34541335 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.118209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAG ACATTAAAAA GAATACCTCG GCATCGGAAT ATTCGGCCAG CAATATCCAA GTATTGGAAG GTCTGGAAGC TGTCCGCAAG CGACCGGCCA TGTATATAGG TGACATCAGC GAAAAGGGAT TGCACCATTT GGTCTATGAG GTTGTAGACA ACTCGATAGA CGAAGCTTTG GCCGGATACT GTGACAATGT AGAGGTAATC ATAGAAGAAG ATAACTCCAT TACGGTTCGT GACAATGGTC GCGGTATTCC GGTGGACTAT CACGAGAAAG AAGGTAAGAG TGCTCTCGAA GTGGTTTTGA CCGTATTGCA TGCCGGAGGT AAGTTTGACA AGGGTTCATA CAAAGTCTCG GGCGGTTTGC ATGGAGTGGG CGTTTCTTGT GTGAATGCAC TTTCCACATA TTTGCGTGCA GAGGTGTATC GTAATGGGAA GATCCATATG CAGGAGTTCA GCTGTGGCAA ACCCTTGCAT GATGTGGAGG TGATAGGCTC CACGGAGCGT ACGGGGACGA CTATTCAGTT CAAACCGGAT AGCTCTATCT TCTCTGTTAC GGAATACCAA TACTCCATAC TGGCCAAGCG TCTCCGCGAA CTTTCTTATC TGAATGCGGG GATTACACTT ACGCTGACGG ATAAACGAAC GCTCAAGGAA GACGGCAGTG GCTACAAGCA AGATGTATTC CGTTCGGAAG AAGGATTGAA GGAGTTTGTC CGTCATCTTG ACCGTATGAA AGAACCGCTG GTGGACAACG TTATCCATAT CGTCACCGAG AAGCAGGGCA TTCCCGTGGA GGTAGCCATG ACGTATAATA CTTCCTATCT GGAGAATGTA TATAGCTACG TCAATGACAT CAATACGATC GAGGGCGGTA CGCATTTGGC CGGATTCCGT CGTGGACTTA CTCGAACTTT GAAGAAATAT GCCACAGACT CCAAACTCCT GGATAAGGTG AAGGTGGAGA TCACCGGCGA CGACTTCCGC GAGGGATTGA CTGCCGTGAT CAGCATCAAA GTGGCCGAAC CTCAGTTCGA AGGACAGACC AAGACCAAGC TCGGTAACAA TGAAGTGACC GGTGCTGTCG ATATGGCTGT AAGCGAAGCA CTCGAATACT ATCTGGAGGA GCATCCGAAA GAAGCCAAAC TGATCGTGGA CAAAGTCGTT TTGGCGGCAA CTGCTCGTCA GGCAGCCCGT AAGGCCCGCG AAATGGTGCA GCGCAAATCG CCCTTGTCCG GTGGAGGATT GCCGGGTAAG CTTGCCGACT GCTCGTCCAA AGACCCGGAG CAGTGCGAAC TCTTCCTTGT CGAGGGTGAT TCGGCCGGCG GAACGGCCAA GCAGGGGCGC GACCGCGAGT TTCAGGCTAT CCTGCCACTG AGGGGAAAGA TCCTCAATGT GGAGAAAGCC ATGCAACACA AGGTATTCGA AAGCGAAGAA ATCCGCAACA TATATACCGC TTTGGGTGTG ACGATCGGAA CGGAAGAGGA CAGCAAAGCC CTTAACCTTT CCAAACTTCG CTATCATAAA GTGGTGATCA TGACCGATGC CGATGTGGAC GGTAGCCATA TCGCTACGCT TATCCTTACG TTCTTCTTCA GGAATATGCG TACGCTCATA GAAAACGGTT ATGTCTTCAT CGCTACTCCT CCTCTCTACC TTTGCAAGAA GGGGAAAGAG CAAGAGTATT GCTGGACAGA GCAGCAGCGT CAAGCGTTTG TCGACCGTTA TGCCGATGGT AATGAAAGCC GTGTGCATGT ACAGCGTTAC AAGGGCCTTG GTGAGATGAA CGAGGAGCAG CTTTGGGAGA CGACGATGGA TCCGGAGAAG AGGACGCTTC GTAAGGTGAC GATCGAGAAT GCTGCTGAGG CAGATGCCAT ATTCTCCATG CTCATGGGAG ACGAGGTAGG TCCGCGCAGG GAGTTTATAG AAGAAAATGC TACTTATGCA AGAATAGATG CTTAG
|
Protein sequence | MNEDIKKNTS ASEYSASNIQ VLEGLEAVRK RPAMYIGDIS EKGLHHLVYE VVDNSIDEAL AGYCDNVEVI IEEDNSITVR DNGRGIPVDY HEKEGKSALE VVLTVLHAGG KFDKGSYKVS GGLHGVGVSC VNALSTYLRA EVYRNGKIHM QEFSCGKPLH DVEVIGSTER TGTTIQFKPD SSIFSVTEYQ YSILAKRLRE LSYLNAGITL TLTDKRTLKE DGSGYKQDVF RSEEGLKEFV RHLDRMKEPL VDNVIHIVTE KQGIPVEVAM TYNTSYLENV YSYVNDINTI EGGTHLAGFR RGLTRTLKKY ATDSKLLDKV KVEITGDDFR EGLTAVISIK VAEPQFEGQT KTKLGNNEVT GAVDMAVSEA LEYYLEEHPK EAKLIVDKVV LAATARQAAR KAREMVQRKS PLSGGGLPGK LADCSSKDPE QCELFLVEGD SAGGTAKQGR DREFQAILPL RGKILNVEKA MQHKVFESEE IRNIYTALGV TIGTEEDSKA LNLSKLRYHK VVIMTDADVD GSHIATLILT FFFRNMRTLI ENGYVFIATP PLYLCKKGKE QEYCWTEQQR QAFVDRYADG NESRVHVQRY KGLGEMNEEQ LWETTMDPEK RTLRKVTIEN AAEADAIFSM LMGDEVGPRR EFIEENATYA RIDA
|
| |