| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1603 |
|---|
| Symbol | |
|---|
| ID | 2552864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 1682305 |
|---|
| End bp | 1682889 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637150233 |
|---|
| Product | putative deoxyribonucleoside-triphosphatase |
|---|
| Protein accession | NP_905733 |
|---|
| Protein GI | 34541254 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.667769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC TCATTTTTGC CACAAACAAT CCACATAAGC TCAACGAGAT TCGTCATATT
CTTGAGGGAA AGGTGGAGAT TGTCGGGCTG GACGAAATAG GTTGTCGGGA GGATATTCCC
GAAACGGCCG ACACACTACA GGGAAATGCT TTGCTCAAAG CAGAATTTGT TCACAAACGA
TATGGTTTAC CTTGCTTTGC TGACGACACA GGCTTGGAAG TAGAAGCTCT TGACAGAGCA
CCCGGCGTCC ACTCTGCACG GTACGCAGGA GAACCGACCA ATGCCGATGC CAATGTACGG
AAACTACTCG AAGCATTGAG CAGTGTACCA CATCCCAGAA AAGCATGCTT CCGTACCGTG
ATCGCCCTGA TCGATGATCA TGGAAAACAC TTCTTCGAAG GGAAGATCGA AGGTACCATA
GCATCTGAAT GCAGAGGATC GGGCGGCTTC GGCTATGACC CCGTTTTCAT CCCGGAGGGA
CACACGCTCA GCTTTGCAGA AATGGGAGAA GAAACCAAAA ATCAAATCAG TCATCGTGCT
TTGGCGGTGG CACAGCTCCG CGATTTTTTA TTATGTGCAA AATAA
|
|---|
| Protein sequence | MEKLIFATNN PHKLNEIRHI LEGKVEIVGL DEIGCREDIP ETADTLQGNA LLKAEFVHKR
YGLPCFADDT GLEVEALDRA PGVHSARYAG EPTNADANVR KLLEALSSVP HPRKACFRTV
IALIDDHGKH FFEGKIEGTI ASECRGSGGF GYDPVFIPEG HTLSFAEMGE ETKNQISHRA
LAVAQLRDFL LCAK
|
|---|
| |