| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1404 |
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| Symbol | |
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| ID | 2551746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1487161 |
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| End bp | 1487877 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637150060 |
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| Product | rhomboid family protein |
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| Protein accession | NP_905563 |
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| Protein GI | 34541084 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.334243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAGCT TTAGAGAAAG GAATTATCAG TTTGCTCCAC CCGTAACGCA GAACCTGATC
ATCATCAATG CGATATTCCT GTTCGCGACT TACGTACTTG AGGCACGATT CAATATCGAT
CTGAACGATA CCATGGGGCT GCATTATTTT CAGGCAGACA GTTTCAATCC CATACAGTTC
GTTTCCTATA TGTTCTTACA CGATGGCCTC TCGCATCTCT TCTTCAATAT GTTTTCCCTA
TGGATGTTCG GACGGCTGAT AGAGCAGTTT TGGGGGGCGA AGCGTTTCCT CATCTTCTAT
GTTATTTGTG GTCTTACGGC TGCATTGGCA CAGCAGATCG TATGGGCTGT GGATCTGATG
CCCATCGTGA ACAGTCCGGC CGAGTTTGTT CGCTTTCCGG AGGGTACGGA GATGCTCAAG
AGTGCTTTCC TCAATTTGCC AACGACGGTC GGTGCCTCCG GAGCCGTATT CGGGTTGCTA
TTGGCCTTCG GGATGCTCTT CCCCAATGGT GAGATCTACC TTTTCTTTAT CCCCATTCCC
ATCAAAGCCA AGTGGTTTGT TATTATATAC GGCCTTGTAG AGCTGTTCCT TGGTGTTGCA
CCGATGGCAG GTGGTAGCAA CATCGCTCAC TTTGCTCATT TGGGTGGTAT GATAGGAGGT
ATTATACTCA TTCTCCTCTG GCGCAGGAAA GGAGAGATCG ATGGACCTTA CAATTAG
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| Protein sequence | MNSFRERNYQ FAPPVTQNLI IINAIFLFAT YVLEARFNID LNDTMGLHYF QADSFNPIQF
VSYMFLHDGL SHLFFNMFSL WMFGRLIEQF WGAKRFLIFY VICGLTAALA QQIVWAVDLM
PIVNSPAEFV RFPEGTEMLK SAFLNLPTTV GASGAVFGLL LAFGMLFPNG EIYLFFIPIP
IKAKWFVIIY GLVELFLGVA PMAGGSNIAH FAHLGGMIGG IILILLWRRK GEIDGPYN
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