Gene PG1330 details

Gene Information

• Locus tag: PG1330
• Symbol: mscL
• ID: 2551872
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1409806
• End bp: 1410225
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637149997
• Product: large conductance mechanosensitive channel protein
• Protein accession: NP_905500
• Protein GI: 34541021
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGAAAT TTATTCAGGA CTTCAAAGCG TTTGCCCTTA AGGGTAACGT AGTGGACATG 
GCTGTCGGTG TGATCATCGG TGGCGCATTC GGAAAGATCG TCACCTCGTT GGTGAACGAC 
ATCATGATGC CTCCCATCAG TTTGCTGACG GGTGGGGTCA ACTTCACAGA TCTGAAATTG 
GTATTGAGCA AGGCTGTCGT CGAAGGCGGA GAGGTCGTGA AACCGGAAGT GTCATGGAAC 
TATGGCAATT TTATCCAGAC TACGGTGGAC TTCCTGATTT TAGCTTTCGT GATCTTCCTG 
ATGATCAAAG CTATCATGGC TGCCAAGAGG AAAGAAGAGG AGGCACCTGC AGCTCCTGCT 
CCTACGCCAC CTGAAATCGA ACTGCTTACA GAGATTCGCG ATTTGCTCAA GAAGCAATAA 

 

Protein sequence

MKKFIQDFKA FALKGNVVDM AVGVIIGGAF GKIVTSLVND IMMPPISLLT GGVNFTDLKL 
VLSKAVVEGG EVVKPEVSWN YGNFIQTTVD FLILAFVIFL MIKAIMAAKR KEEEAPAAPA 
PTPPEIELLT EIRDLLKKQ