| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1297 |
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| Symbol | rpsA |
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| ID | 2551856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1375971 |
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| End bp | 1377770 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637149969 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | NP_905473 |
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| Protein GI | 34540994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACT TAAAGAACAT TCAGCCCAGA GAGGATTTCA ACTGGGAAGA GTTTGAGGCC
GGTGGCGTCC ATGCTGCCGT GAGTCGTCAG GAGCAGGAAG CTGCTTATGA CAAAACGCTC
AATACCATCA AGGAAAAGGA AGTGGTAATG GGTAGGGTAA CTGCTATCAA CAAGCGTGAA
GTGGTTATCA ATGTAGGGTA CAAATCGGAA GGTGTGGTAC CTGCAACAGA ATTCCGCTAC
AATCCCGAAC TCAAAGTGGG AGACGAAGTG GAAGTTTATA TCGAGAATCA GGAAGATAAG
AAGGGCCAGC TCGTCTTGTC TCACCGCAAG GCTCGTGCCG CTCGCTCTTG GGAGCGCGTG
AACGAGGCTC TCGAAAAAGA CGAAATCGTA AAGGGCTATG TGAAGTGTCG TACCAAGGGT
GGTATGATCG TCGATGTATT CGGTATCGAG GCTTTCCTCC CGGGATCACA GATCGACGTG
CGCCCCATTC GCGACTACGA TGCATTCGTT GAGAAGACGA TGGAGTTCAA GATTGTGAAA
ATCAATCAAG AATATAAGAA TGTAGTTGTT TCCCACAAGG TGCTCATCGA AGCAGAGCTC
GAACAACAGA AGAAAGAAAT CATCGGCAAG CTCGAAAAAG GGCAGGTACT CGAAGGTATC
GTCAAGAATA TTACTTCTTA CGGAGTATTT ATCGACCTCG GTGGAGTGGA TGGTCTTATC
CATATCACTG ACCTTTCATG GGGTCGTGTG GCTCATCCGG AAGAAATCGT ACAGCTGGAT
CAGAAGATCA ATGTCGTTAT CCTCGACTTT GATGAAGATC GCAAGCGTAT CGCTCTCGGA
CTCAAACAGC TGATGCCTCA TCCTTGGGAT GCTCTCGACA GCGAGCTTAA GGTAGGCGAT
AAGGTGAAGG GTAAAGTTGT GGTGATGGCA GATTACGGTG CTTTCGTTGA GATTGCACAG
GGCGTTGAGG GTCTTATCCA CGTAAGCGAA ATGTCATGGA CACAGCACTT GCGTTCTGCT
CAGGACTTCC TGCATGTAGG CGACGAAGTG GAAGCCGTGA TCCTGACGCT CGACCGCGAA
GAACGCAAAA TGTCGCTCGG TCTGAAGCAA CTCAAGCCGG ATCCTTGGGC TGATATCGAA
ACTCGTTTCC CTGTAGGCTC TCGTCACCAT GCTCGTGTTC GCAACTTCAC CAATTTCGGT
GTATTCGTTG AGATCGAAGA GGGCGTAGAT GGCCTTATCC ATATTTCCGA CCTTTCTTGG
ACGAAGAAGA TCAAACACCC CAGCGAGTTT ACGGAAGTAG GTGCTGATAT CGAAGTTCAG
GTAATCGAGA TCGACAAGGA AAACCGTCGT CTCAGCTTGG GTCACAAACA GTTGGAAGAG
AATCCTTGGG ATGTATTCGA GACGGTATTC ACTGTAGGAT CTATCCACGA AGGAACGGTA
ATCGAAGTGA TGGACAAGGG TGCTGTCGTT TCTCTGCCTT ACGGTGTGGA AGGTTTTGCC
ACTCCGAAGC ACATGGTGAA GGAAGATGGC TCACAGGCTG TACTCGAAGA GAAGTTACCT
TTCAAGGTTA TTGAGTTCAA TAAGGATGCC AAGCGAATCA TTGTATCTCA TAGCCGTGTA
TTCGAAGATG AGCAGAAAAT GGCTCAGCGT GAAGCCAATG CAGAGCGTAA GGCTGAAGCC
AAAGCGGCTC AGAAAGAAGC TGCTGCCGAA GCTGCCAATC CTGCACAGGC TGTAGAGAAA
GCCACTCTCG GAGACCTCGG CGAGCTGGCC GCTTTGAAAG AAAAGCTTTC AGAAAACTAA
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| Protein sequence | MENLKNIQPR EDFNWEEFEA GGVHAAVSRQ EQEAAYDKTL NTIKEKEVVM GRVTAINKRE
VVINVGYKSE GVVPATEFRY NPELKVGDEV EVYIENQEDK KGQLVLSHRK ARAARSWERV
NEALEKDEIV KGYVKCRTKG GMIVDVFGIE AFLPGSQIDV RPIRDYDAFV EKTMEFKIVK
INQEYKNVVV SHKVLIEAEL EQQKKEIIGK LEKGQVLEGI VKNITSYGVF IDLGGVDGLI
HITDLSWGRV AHPEEIVQLD QKINVVILDF DEDRKRIALG LKQLMPHPWD ALDSELKVGD
KVKGKVVVMA DYGAFVEIAQ GVEGLIHVSE MSWTQHLRSA QDFLHVGDEV EAVILTLDRE
ERKMSLGLKQ LKPDPWADIE TRFPVGSRHH ARVRNFTNFG VFVEIEEGVD GLIHISDLSW
TKKIKHPSEF TEVGADIEVQ VIEIDKENRR LSLGHKQLEE NPWDVFETVF TVGSIHEGTV
IEVMDKGAVV SLPYGVEGFA TPKHMVKEDG SQAVLEEKLP FKVIEFNKDA KRIIVSHSRV
FEDEQKMAQR EANAERKAEA KAAQKEAAAE AANPAQAVEK ATLGDLGELA ALKEKLSEN
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