Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1058 |
Symbol | |
ID | 2553111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1124174 |
End bp | 1126192 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637149760 |
Product | OmpA family protein |
Protein accession | NP_905274 |
Protein GI | 34540795 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0880702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAGCG GACATCATAA AATCCATTAT CCTTTTCTTA TCCTGTTGGT ATGCCTTGCT TTTGCTGCCT GCAAGAGCGT GAAGTTGAAA GATGCGGAGA AGGCACATGA TCGCCAAGAG TATACCAAGG CTGCCGATAT GTACAATACA TTATACAGGC GTACCCGACG AAAGCAGGTG GAGATGAAAG CTTATACGGC TTTCCGATCC GGTGAAAACT ATCGTGCCGC CGGCAGACAA GCCAAAGCTT TGCGTGGCTA TCTGAATGCC AGACGCTACG GGTATCCGGA TTCTGTGGTA CTGCTCCGTT TGGCACAGAC TTATCAGCAA GGAGGTAACT ATAAGGAAGC CGAGGTACTC TTCCGTGGAT ATCTGGAAGC TTATCCGAAA AGTTATTTTG CAGCTATCGG TTTGGAGGGG TGTCTCTTTG CCCGCCAGCA AAAGGAATAT CCTACACGTT ACCGGATACG GCGAGCTGCC GAGTGGAATT CGGCACGGGG CGACTTCGGC CCGGCCTATG CACCCGATGC TTCGGCTCTC TATTTCACAT CGAGCAGAAG CAAAGACGAC GGTTTGGATA ATAGCAGCAT AACGGGACTG AAACCCAACG ACATTTATAT CATCAAACGA GATGCACAAG GACGATGGGG ACGTCCCGAT AGCGTGTCCG GAGGAATCAA CACTCCATGG GATGAAGGCG TGCCAACGAT CACGCCCGAT GGTAGTACCA TATATTATAC GTTGGCGCAG CAAGGAGCCG ATTACGACCG TACGGTACAG ATCTATTCCG CCGCTCGGAG CGGAGAAGGC GGTTGGAGCA ACGGTTCGCT CGTGGACATT ATGCGCGATT CGCTCCGTAT GGCTGCTCAT CCCTCTATGT CGGCATCCGG CGATTACCTG TATTTCGTCA GCAATATAGG CGGTAGCTAT GGCGGCAAGG ATATTTATCG TGTCAAGGTG TCGGATCGTT CTTATGGTTC ACCGGAGAAT TTGGGGCCTG ATATCAATAC GCCGGGGGAC GAAATGTTTC CCTTCATAGA TGGGGATAGT ACCCTTTTCT TCGCTTCGGA CGGACACGCC GGTCTGGGAG GACTGGATAT TTTCAAAGCC ACGCTGGACT CTACCGGCCA ATGGCATGTA GTCAATATGG GACAACCGGT CAATTCCTCT GCCGATGATT TCGGCTTGGC TGTGGAGCCT AAAGGCAAAA ACAAAGAAGA AGCTTTGCCG GACAACGGAG TCAAAGGTGT ATTTTGTTCC AACCGAGGCG ATGCACGCGG ATGGCCGCAC CTCTTCCATT TCGAACTGCC GGCTATCTAC ACCGAGATTC AAGGTTATGT GATGGACAGA GAAGAAAATC CCATAGCCGG AGCCACTGTC AGGATCGTAG GCGAACGCGG CCCCGTAGGA CAGGGATTCG TGACTACTCG TGACGATGGC TCCTATAAGA TGAGCGTGCA GGGCGATACT CGCTATGTAA TGCTTGCCGG AGCATCGGGT TATTTGAATC AGTACGTAGA ACTCAAGACC GATACCGCCA AGCAGAGTGA GACCTACTAT GTGGACTTTT TCCTTGCATC GCGTGAGAAA GCCGAGGGCT TGCAAAATAT TTTCTATGAT TTCGATAAAG CTACTCTTCG CCCCGAAAGC ATGAAGAGCT TGGACGAACT GATTCGTATC CTCACGGACA ATCCGGATAT TCGGATCGAA TTGGGTTCGC ATGCCGACAG GAAAGGCCCC GATGCTTACA ACCTCGGACT ATCTGACCGC AGAGCCAAAT CCGTGGTGGA TTACCTCACG AGTCGTGGCA TAGCGGCCGA CAGGCTTACG TGGAAAGGCT ACGGTAAGTC TGTCCCCAAG ACGGTGACAG CCAAAATTGC CGAACGGCAC GATTTCCTGA AGGAAGGCGA TGTGCTCACC GAGGAATTCG TAGCACCTTT GACCGAGGAG CAGCAGTCAG TCTGCGACCA ACTGAACCGT CGTACCGAGT TCCGTGTGAT CGAAGAAGAG TTGCGTTAA
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Protein sequence | MYSGHHKIHY PFLILLVCLA FAACKSVKLK DAEKAHDRQE YTKAADMYNT LYRRTRRKQV EMKAYTAFRS GENYRAAGRQ AKALRGYLNA RRYGYPDSVV LLRLAQTYQQ GGNYKEAEVL FRGYLEAYPK SYFAAIGLEG CLFARQQKEY PTRYRIRRAA EWNSARGDFG PAYAPDASAL YFTSSRSKDD GLDNSSITGL KPNDIYIIKR DAQGRWGRPD SVSGGINTPW DEGVPTITPD GSTIYYTLAQ QGADYDRTVQ IYSAARSGEG GWSNGSLVDI MRDSLRMAAH PSMSASGDYL YFVSNIGGSY GGKDIYRVKV SDRSYGSPEN LGPDINTPGD EMFPFIDGDS TLFFASDGHA GLGGLDIFKA TLDSTGQWHV VNMGQPVNSS ADDFGLAVEP KGKNKEEALP DNGVKGVFCS NRGDARGWPH LFHFELPAIY TEIQGYVMDR EENPIAGATV RIVGERGPVG QGFVTTRDDG SYKMSVQGDT RYVMLAGASG YLNQYVELKT DTAKQSETYY VDFFLASREK AEGLQNIFYD FDKATLRPES MKSLDELIRI LTDNPDIRIE LGSHADRKGP DAYNLGLSDR RAKSVVDYLT SRGIAADRLT WKGYGKSVPK TVTAKIAERH DFLKEGDVLT EEFVAPLTEE QQSVCDQLNR RTEFRVIEEE LR
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