Gene PG1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1058 
Symbol 
ID2553111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1124174 
End bp1126192 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content52% 
IMG OID637149760 
ProductOmpA family protein 
Protein accessionNP_905274 
Protein GI34540795 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0880702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAGCG GACATCATAA AATCCATTAT CCTTTTCTTA TCCTGTTGGT ATGCCTTGCT 
TTTGCTGCCT GCAAGAGCGT GAAGTTGAAA GATGCGGAGA AGGCACATGA TCGCCAAGAG
TATACCAAGG CTGCCGATAT GTACAATACA TTATACAGGC GTACCCGACG AAAGCAGGTG
GAGATGAAAG CTTATACGGC TTTCCGATCC GGTGAAAACT ATCGTGCCGC CGGCAGACAA
GCCAAAGCTT TGCGTGGCTA TCTGAATGCC AGACGCTACG GGTATCCGGA TTCTGTGGTA
CTGCTCCGTT TGGCACAGAC TTATCAGCAA GGAGGTAACT ATAAGGAAGC CGAGGTACTC
TTCCGTGGAT ATCTGGAAGC TTATCCGAAA AGTTATTTTG CAGCTATCGG TTTGGAGGGG
TGTCTCTTTG CCCGCCAGCA AAAGGAATAT CCTACACGTT ACCGGATACG GCGAGCTGCC
GAGTGGAATT CGGCACGGGG CGACTTCGGC CCGGCCTATG CACCCGATGC TTCGGCTCTC
TATTTCACAT CGAGCAGAAG CAAAGACGAC GGTTTGGATA ATAGCAGCAT AACGGGACTG
AAACCCAACG ACATTTATAT CATCAAACGA GATGCACAAG GACGATGGGG ACGTCCCGAT
AGCGTGTCCG GAGGAATCAA CACTCCATGG GATGAAGGCG TGCCAACGAT CACGCCCGAT
GGTAGTACCA TATATTATAC GTTGGCGCAG CAAGGAGCCG ATTACGACCG TACGGTACAG
ATCTATTCCG CCGCTCGGAG CGGAGAAGGC GGTTGGAGCA ACGGTTCGCT CGTGGACATT
ATGCGCGATT CGCTCCGTAT GGCTGCTCAT CCCTCTATGT CGGCATCCGG CGATTACCTG
TATTTCGTCA GCAATATAGG CGGTAGCTAT GGCGGCAAGG ATATTTATCG TGTCAAGGTG
TCGGATCGTT CTTATGGTTC ACCGGAGAAT TTGGGGCCTG ATATCAATAC GCCGGGGGAC
GAAATGTTTC CCTTCATAGA TGGGGATAGT ACCCTTTTCT TCGCTTCGGA CGGACACGCC
GGTCTGGGAG GACTGGATAT TTTCAAAGCC ACGCTGGACT CTACCGGCCA ATGGCATGTA
GTCAATATGG GACAACCGGT CAATTCCTCT GCCGATGATT TCGGCTTGGC TGTGGAGCCT
AAAGGCAAAA ACAAAGAAGA AGCTTTGCCG GACAACGGAG TCAAAGGTGT ATTTTGTTCC
AACCGAGGCG ATGCACGCGG ATGGCCGCAC CTCTTCCATT TCGAACTGCC GGCTATCTAC
ACCGAGATTC AAGGTTATGT GATGGACAGA GAAGAAAATC CCATAGCCGG AGCCACTGTC
AGGATCGTAG GCGAACGCGG CCCCGTAGGA CAGGGATTCG TGACTACTCG TGACGATGGC
TCCTATAAGA TGAGCGTGCA GGGCGATACT CGCTATGTAA TGCTTGCCGG AGCATCGGGT
TATTTGAATC AGTACGTAGA ACTCAAGACC GATACCGCCA AGCAGAGTGA GACCTACTAT
GTGGACTTTT TCCTTGCATC GCGTGAGAAA GCCGAGGGCT TGCAAAATAT TTTCTATGAT
TTCGATAAAG CTACTCTTCG CCCCGAAAGC ATGAAGAGCT TGGACGAACT GATTCGTATC
CTCACGGACA ATCCGGATAT TCGGATCGAA TTGGGTTCGC ATGCCGACAG GAAAGGCCCC
GATGCTTACA ACCTCGGACT ATCTGACCGC AGAGCCAAAT CCGTGGTGGA TTACCTCACG
AGTCGTGGCA TAGCGGCCGA CAGGCTTACG TGGAAAGGCT ACGGTAAGTC TGTCCCCAAG
ACGGTGACAG CCAAAATTGC CGAACGGCAC GATTTCCTGA AGGAAGGCGA TGTGCTCACC
GAGGAATTCG TAGCACCTTT GACCGAGGAG CAGCAGTCAG TCTGCGACCA ACTGAACCGT
CGTACCGAGT TCCGTGTGAT CGAAGAAGAG TTGCGTTAA
 
Protein sequence
MYSGHHKIHY PFLILLVCLA FAACKSVKLK DAEKAHDRQE YTKAADMYNT LYRRTRRKQV 
EMKAYTAFRS GENYRAAGRQ AKALRGYLNA RRYGYPDSVV LLRLAQTYQQ GGNYKEAEVL
FRGYLEAYPK SYFAAIGLEG CLFARQQKEY PTRYRIRRAA EWNSARGDFG PAYAPDASAL
YFTSSRSKDD GLDNSSITGL KPNDIYIIKR DAQGRWGRPD SVSGGINTPW DEGVPTITPD
GSTIYYTLAQ QGADYDRTVQ IYSAARSGEG GWSNGSLVDI MRDSLRMAAH PSMSASGDYL
YFVSNIGGSY GGKDIYRVKV SDRSYGSPEN LGPDINTPGD EMFPFIDGDS TLFFASDGHA
GLGGLDIFKA TLDSTGQWHV VNMGQPVNSS ADDFGLAVEP KGKNKEEALP DNGVKGVFCS
NRGDARGWPH LFHFELPAIY TEIQGYVMDR EENPIAGATV RIVGERGPVG QGFVTTRDDG
SYKMSVQGDT RYVMLAGASG YLNQYVELKT DTAKQSETYY VDFFLASREK AEGLQNIFYD
FDKATLRPES MKSLDELIRI LTDNPDIRIE LGSHADRKGP DAYNLGLSDR RAKSVVDYLT
SRGIAADRLT WKGYGKSVPK TVTAKIAERH DFLKEGDVLT EEFVAPLTEE QQSVCDQLNR
RTEFRVIEEE LR