Gene PG0899 details

Gene Information

• Locus tag: PG0899
• Symbol: cydB
• ID: 2552050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 963587
• End bp: 964750
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637149624
• Product: cytochrome d ubiquinol oxidase, subunit II
• Protein accession: NP_905142
• Protein GI: 34540663
• COG category: [C] Energy production and conversion
• COG ID: [COG1294] Cytochrome bd-type quinol oxidase, subunit 2
• TIGRFAM ID: [TIGR00203] cytochrome d oxidase, subunit II (cydB)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAATACG CATTGTTACA ACACTACTGG TGGTTCCTCG TCTCATTACT GGGAGCACTC 
TTGGTTTTCT TGCTATTTGT ACAAGGAGGA CAGTCATTCC TCTTCAGTCT TGGCAAAGAT 
GAACTGACTC AGAAAATGAT GGTCAATTCG ACCGGACGCA AATGGGAGTT CACTTTCACT 
ACATTGGTTA CTTTCGGAGG AGCTCTCTTT GCTTCGTTTC CTCTTTTCTA TAGCACCAGC 
TTCGGAGGAG CATATTGGGT ATGGATGCTG ATCCTCTTCT GCTTCATTAT CCAAGCTGTC 
TCCTACGAGT ATCAATCCAA ACATGGTAAT GTATGGGGGA GGAAAACCTA CCAAATACTG 
CTTTTCATCA ATGGTGTACT GGCTCCGGTT CTGCTCGGAA CCGCTGTTTC CACATTCTTT 
ACGGGCAGCA GCTTCGTGGT AAACAAGATG GCGATGTTCG ACCTCTCCGG CGGCAACCAG 
ATCGTTTCTG CCTGGCAGCC CTTCAATGGG TGGCAACTGA GAGGCCTTGA AGCTGTTTTG 
AACCTGTGGA ACGTGGTTCT CGGATTGGCT GTATTCTTCC TTGCCAGAGT ATCGGCTCTG 
CTTTATTTCA TCAATAATAT CGATGACGAA AGTCTCTATG CGGCAGCCAA ACGCCGACTT 
TGGGCCAATA CGGTCGCATT CCTGATTTTC TTTCTGGCAT ACATAGCTTT CCTGCTGACT 
ACGGAAGGAT TTGCCGTGAA TCCCGTTTCC AAAGAGGTGT ATATGGAGCC ATACAAGTAC 
CTGTACAATT TCTTGGATAT GCCGGCCGTT CTGGCTGTAT TCCTGTTGGG AGTAATCCTC 
GTACTTGGCG GTATAGGTTT GACTCTACTG CGTAAAGGCT TCAAACGCGG AATCTGGCTA 
CACGGTACGG GAACCGTACT GACTGTGCTT GCCCTACTAC TTGTAGCCGG TTGGAACGAT 
ACGTCTTGGT ACCCCTCCAC ATACGATCTG CAAAGTTCGC TTACGATCGA GAATGCCAGC 
TCCAGCCATT TCACGCTGAA GGTAATGAGC TACGTCTCTC TCCTTATTCC TTTCGTTTTG 
GCTTACATTT TCTATGCTTG GCGCGCACTG GACATTCGTA AAATCACAAA AAAAGAAATG 
GAGCAGGACG ATCACGTCTA TTGA 

 

Protein sequence

MEYALLQHYW WFLVSLLGAL LVFLLFVQGG QSFLFSLGKD ELTQKMMVNS TGRKWEFTFT 
TLVTFGGALF ASFPLFYSTS FGGAYWVWML ILFCFIIQAV SYEYQSKHGN VWGRKTYQIL 
LFINGVLAPV LLGTAVSTFF TGSSFVVNKM AMFDLSGGNQ IVSAWQPFNG WQLRGLEAVL 
NLWNVVLGLA VFFLARVSAL LYFINNIDDE SLYAAAKRRL WANTVAFLIF FLAYIAFLLT 
TEGFAVNPVS KEVYMEPYKY LYNFLDMPAV LAVFLLGVIL VLGGIGLTLL RKGFKRGIWL 
HGTGTVLTVL ALLLVAGWND TSWYPSTYDL QSSLTIENAS SSHFTLKVMS YVSLLIPFVL 
AYIFYAWRAL DIRKITKKEM EQDDHVY