Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0598 |
Symbol | |
ID | 2552475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 654617 |
End bp | 656572 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637149360 |
Product | hypothetical protein |
Protein accession | NP_904885 |
Protein GI | 34540406 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAC TACCGGTCAA GAGGCTCTAC CTTTTCATGC TACAGACTTT TCTGCCACTC CTGCTGATGA CTTTTGCCAT CTGTTGGTTT GTGGTTTTGA TGCAGTTTCT GTGGAAATAT GTGGACGACA TGGTCGGCAA AGGACTGAGT GCCATCATCT TGTCCAAGAT GCTTTTCTAC GCAGCCATGA CCTTGGTTCC CATGGCACTC CCGCTGGGTG TCCTGTTGGC CTCATTGATG ACCTTCGGAA ATTTGGGCGA ACGCTTGGAA TTGCTCGCCA TGAAGTCGGC CGGAGTACCG CTCTACCGCA TCATGAAACC TCTTTTCTTC TCTGTGGTAG CCATTGCTTG CGGGCTTTTC ATCTTTCAGA ACGATCTGAT GATCCAGTCC CAAGTGAAAT TCTACACGAT CCTGTTTTCT GCGAGAAGGG CGACTCCGGA ACTGGAAATT CCCGAAGGTT CTTTCTACAA TGGTATTCGT GGGTACAATC TCTTTGTAGC CAAGAAAGAT CGCCGCACGG GAATGCTCCA CGACATGATG ATCTATGACC ACTCTCAAGG GTTTGCCGAT GCCCGGATTA TTGTCGCTGA CAGCGGCAAG CTGAAGATGG ATGAGGGCAA AACATTCCTT ACCCTCATGC TCCACTCCGG CGAAACGTTC CAAAATCTCC GCTCGCAACA GACGGAAAGC AATGCCCCCA CACCGTACAT GCGCGAACGT TTCCGTACAA AAGAGATCGT CATCCCCTTC GATGCCAACT TCAGTCTGAT GGATGAAGGA GCTATGCGTG GGGAATATGT GGGCAAGAAC CTGATCCAGT TGCAACGATT CATAGACACC GTCACTCTCC GTGTCGATAG TGCTTCGTTC CGAAATGCGA ACAATCTATA TATCCAGACC TACAACGCCC GCTATGCGAC ATCGCCGCTT TCTCCTCTCG ATACATCGGC AATTTCGATT GCCTACAGAA CTAAAATAGA GCAGGCTGCC AAGGCAATAC CGACAACGCT GGACAGCATA GAGAGCAGAT CGACCCTTTC GCAGCGTTTG GAAGCCCGAT CCGTAATGAT AAACCGATTC GACACCTACA TCGGCGAATG CATGATCATG AAAGAATCCA CCGCATTCGA AAGAGACAGA CGTATCTCCC ATATGAGGGA GTGGCACACC AAGTTTACCT ATCCGGTAGC CTGCCTGATC TTTTTCTTTA TCGGTGCGCC ATTGGGTGCT ATCATACGAA AAGGAGGACT CGGCACGCCT ATTGTGGCAT CGGTGCTTTT CTTTGTTCTC TATTATATGG TAGATACCTT TGGTGTTAAG ATGGCCAAGA CCGAAGAGTG GCCTGTCTGG TTGGGAATGT GGCTGAGCAC TTTTGTGTTA GTGCCGTTTG GCTTTTTCCT GACCTATAAG GCTACACGCG ACTCCTCTAC GCTAAATGTG GATACCTATG TGAACTGGAT CAAACGTGTC TTCAGACCTC AACGGCTACG CCTGCTGGAA AGGAAAGAGC TTGTAGTCGA AGAGGCAGAC TATGAATACG CTTTGGGTGA AATAGCCAAT GTCCGCTCTG ATGCACAGCA AATGCTCGGT TCGCGAATCA TGAGCCGCCC GCTCCCCTTC ATCTGGCTGT TTGGCGGTGA TCTATCCTCG CAAAAGGAAC TCAGTGTCCG CGTAGATACT ATGGTGGAAT ACCTCCATAA TACCACCGAC AACCTCATTT TTGCCAAGCT GATGGATGTA CCTCCGCTGC CCACTACTCT TTCGCACTGG TTACCCAAGG ACAAACGATC GGGCATCGCT CTGGGACTAC TCCTGCCGAT CTCTCTCCCG ATGCTCATAT ACCTCGGAAG CCGGCGCAAA CTATTGAAAG AAGAACTGCA TACGTTGATC AAGACGTGTG ACGAATTGGA AGAAATAATC AACAAGAAAA AATACAAACC AAATCATATA AAGTAA
|
Protein sequence | MKKLPVKRLY LFMLQTFLPL LLMTFAICWF VVLMQFLWKY VDDMVGKGLS AIILSKMLFY AAMTLVPMAL PLGVLLASLM TFGNLGERLE LLAMKSAGVP LYRIMKPLFF SVVAIACGLF IFQNDLMIQS QVKFYTILFS ARRATPELEI PEGSFYNGIR GYNLFVAKKD RRTGMLHDMM IYDHSQGFAD ARIIVADSGK LKMDEGKTFL TLMLHSGETF QNLRSQQTES NAPTPYMRER FRTKEIVIPF DANFSLMDEG AMRGEYVGKN LIQLQRFIDT VTLRVDSASF RNANNLYIQT YNARYATSPL SPLDTSAISI AYRTKIEQAA KAIPTTLDSI ESRSTLSQRL EARSVMINRF DTYIGECMIM KESTAFERDR RISHMREWHT KFTYPVACLI FFFIGAPLGA IIRKGGLGTP IVASVLFFVL YYMVDTFGVK MAKTEEWPVW LGMWLSTFVL VPFGFFLTYK ATRDSSTLNV DTYVNWIKRV FRPQRLRLLE RKELVVEEAD YEYALGEIAN VRSDAQQMLG SRIMSRPLPF IWLFGGDLSS QKELSVRVDT MVEYLHNTTD NLIFAKLMDV PPLPTTLSHW LPKDKRSGIA LGLLLPISLP MLIYLGSRRK LLKEELHTLI KTCDELEEII NKKKYKPNHI K
|
| |