Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0516 |
Symbol | |
ID | 2551479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 558027 |
End bp | 559274 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637149281 |
Product | hypothetical protein |
Protein accession | NP_904811 |
Protein GI | 34540332 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00403356 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCAAAAA AATATCTAAG CACACTGAAA GTATCGGCCG GACTATTCTC CGCCATCTTG ATTGTCTTAT TGGCCAGCGG ACTTCTGGCC AATGCACAGA CAGTTAGCAC GGAGACGAAA GATCAAGGTC TGCAGATGAG CCTCTTGATC TCTTCTCCTT CTACAGAAGC GGTATACACT CGCTACGGTC ATGTCGCATT CAGGATTCTC AATCCCGTAC AAGGGACGGA TATTGCTTAC AATTATGGCA TGTTCGATTA TAACGAACCT AATTTCATGC TTCGATTTGT ACGAGGCGAA ACGGATTATT ACGTTGAAGC TCTTTATACA TCCTATTATG TGGAAGAATA CCTTCGGAGC GGAAGAGGAA TCGTGGAATT AGTATTGAAT CTCACACAGG AAGAGATCGA AAAAGCTGAG AGGTATTTGG CATGGAATAT TCGCCCCGAG AATAAACGAT ACCGCTATAA TATCTTTTAT GACAACTGTG CTACCCGCCT TATCGAGATC ATAAAAGAAA CCACAGGAGC TACCTTGCAA ATCCCTCATG AGGGTGAGGA GAGAAAGTGG AGACAGCTGA TCGATGAATG CTGTACCGAT GCCCCTTGGG TCAAGTTCGG CATCGATCTG GCTCTCGGGG CGAAAACAGA TACCTATGCC AATCCGGAGG AGCAGTTATT CCTGCCGAAT AGAATGTTGG ATCTGCTACC ACGTACCACT CTACTCTATC CCAATGGTCG ATCAACGCCA CTCATCAGGG ATACCAAAGA GTGGTTTCCG GCTAAGCCGG CCAGTATGGA ACCTGCGGAG GAGGGCTGGC CTACACCTTT ATTGGCTTCT ATAGCTTTGC TGATAGTTTC TATTGCAGTA GCTGTTTGGG ATGTTCGTCG CAAGGATATA TGCTATGTAT ATGACTCTAT CTTATTAGCC ATTATGGGGT TATCGGGATG TGTTATTTTC ATTCTGTCAT TTTTCTCAGA ACATCCGCAT ACCAACCCGA ATTACAATCT TTTCCTGCTT CATCCCCTTC ATCTGCTTAT CGGGTTGCCT CTGACTGTGG TACCGCTCTT TCACCGAGCA GGCTTTGTCT ATCATTTTAT TAACTTTGCA GAGCTAAGTT TGATCGGTTT GGCAATATGG TTTTTGCCGC AACAAGTAGT GCTCCCGCTC TATGTGGCCG GCATTGCTCT ATGGTTGCTT TCCGCTCGCT GGATATTGGT AAATAGATGG AGAAAGAACG TTCGGTGA
|
Protein sequence | MAKKYLSTLK VSAGLFSAIL IVLLASGLLA NAQTVSTETK DQGLQMSLLI SSPSTEAVYT RYGHVAFRIL NPVQGTDIAY NYGMFDYNEP NFMLRFVRGE TDYYVEALYT SYYVEEYLRS GRGIVELVLN LTQEEIEKAE RYLAWNIRPE NKRYRYNIFY DNCATRLIEI IKETTGATLQ IPHEGEERKW RQLIDECCTD APWVKFGIDL ALGAKTDTYA NPEEQLFLPN RMLDLLPRTT LLYPNGRSTP LIRDTKEWFP AKPASMEPAE EGWPTPLLAS IALLIVSIAV AVWDVRRKDI CYVYDSILLA IMGLSGCVIF ILSFFSEHPH TNPNYNLFLL HPLHLLIGLP LTVVPLFHRA GFVYHFINFA ELSLIGLAIW FLPQQVVLPL YVAGIALWLL SARWILVNRW RKNVR
|
| |