Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0514 |
Symbol | secA |
ID | 2552320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 553019 |
End bp | 556360 |
Gene Length | 3342 bp |
Protein Length | 1113 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637149279 |
Product | preprotein translocase subunit SecA |
Protein accession | NP_904809 |
Protein GI | 161579531 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00876385 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGGATTCA ACGAATTCAT GTCGAAGCTT TTCGGCAACA AATCGCAGCG TGACTTGAAA GAGGTAAAAC CTTTCGTGGA CAAAATCAAA GTTGCATATG GCGAAATCGA ACGGCTGTCA GACGACGATC TTCGCGGACG TACAGCCATC TTGCGCCAAA AGATACAAGA CTATGTAAAA GATGAGAGAG CAGAAATCGA CAAGCTGAAA GTCGAGGTGG AAGGCAAGGA CTTGGACGAA CGAGAGGAGA TTTGGGCTCA AGTAGACAAG CTCGAAAAAG AGATTTTGGA CAAAATGGAA GTCGTTTTGG ATGAAATTCT CCCCGAAGCA TTTGCTATTA TCAAAGATAC TGCTCGCAGA TTCGCCCAAA ACGAAACTAT TCGAGTCAAA GCCACTGATC TTGATCGTGA TCTCGCAATC AACCATGATT TCGTCTCGAT CGAGGGAGAT ACCGCCGTCT ACCAAAACCA CTGGGTGGCA GGAGGCAATG AAATCTTGTG GGACATGATT CACTATGATG TTCAGCTCAT CGGTGGTACA GTCTTACACA AAGGAAAAAT TGCCGAAATG GCTACCGGTG AGGGAAAGAC ATTGGTAGCT ACCCTACCCG TATTCCTCAA TGCTCTGACT GGTAACGGCG TGCATGTAGT GACGGTCAAT GACTACCTTT CTAAACGTGA CTCGGAATGG ATGGGGCCAC TGTATATGTT CCATGGTTTA ACCGTGGATT GCATAGATAA GCACCAGCCC AATTCGGATG CCCGCCGCAA GGCCTATAAT GCAGATATTA CATTTGGCAC CAATAACGAA TTCGGCTTCG ACTACTTGCG CGACAATATG GCCACGAGTC CTAAGGACTT GGTGCAGCGT AAGCACAACT ACGCCATAGT CGACGAGGTG GATTCCGTAT TGATCGATGA CGCCCGAACT CCTTTGATTA TTTCCGGCCC TACTCCCAAA GGTGAAGATC AGTTGTTCGA GGAGTTTTTG CCCAATGTGG AGAAAGTTGT CGAGGCACAG CGTAAACTTT GTTCACAATT ACTTATCGAT GCCAAGAATA AGATGGCATC TGAGGATAAG AAAGAACAGG AAGAGGGTTC TTTGCTACTC TTTCGTTCGT TCAAGGGTCT TCCCAAAAAT AAACAGTTGA TCAAGTATCT GAGCGAACCC GGCATCAAGA GCTCCATGCT GAAGACCGAA GAAGCATACA TGGCTGAAAA CATGAGGAAT ATGCATTTGG TCACAGACGA ATTGTATTTC ATCATAGATG AAAAGCGTAA TAGCGTAGAG CTTACCGAGA AAGGTATCGA CCTTCTGACG TCCCGTACAG ATGACCCGAA ATTCTTCGTC TTGCCTGATA TTGCAGCTGA GTTATCCGCT TTGGACAATA TGGAATCCGA TGCAGAAAAA CGTCGCGAAG CCAAGGATGA GATCATAGCC AACTATTCGA TCAAGAGCGA GCGTGTACAT ACTGTCAATC AGTTGCTCAA AGCCTATGCC CTCTTCGAGA AGGATGATCA ATACGTGGTC ATGGACAATA AGGTGCTCAT CGTAGACGAG CAGACCGGAC GTATCATGGA CGGACGTCGA TATTCGGATG GCCTCCATCA GGCTATCGAA GCCAAAGAGC ATGTGAAAGT AGAGGCTGCG ACACAGACAT TTGCAACTAT CACTTTGCAG AACTATTTCC GCATGTATCA TAAGCTGGCA GGGATGACCG GTACTGCTGA AACTGAAGCG GGAGAGCTTT GGGACATCTA CAAACTGGAC GTTGTAGTTA TTCCGACAAA CAAGCCTATC GCCCGTAAGG ATATGAATGA TCGTATCTAT AAGACGGCAC GTGAAAAATA TGCAGCAGTT ATCGAAGAGA TTGTACGTCT TGTCGAAGAG GGCAGACCTG TACTTGTCGG TACTACTTCG GTGGAAATAT CCGAATTGTT GAGCCGTATG TTACGCTTGC GTGGCATCCA ACACAATGTA CTCAATGCCA AATTGCATCA GAAGGAGGCC GAGATTGTAG CTCAGGCCGG TCAGAAAGGA ACTGTTACCA TCGCAACGAA CATGGCCGGT CGTGGTACCG ACATCAAGCT CTCTGCCGAG GTTAAGAAAG CCGGGGGTTT GGCTATCATT GGTACGGAAA GGCACGAATC CAGACGAGTG GACAGACAGC TTCGTGGTCG TTCCGGCCGT CAGGGTGATC CCGGTTCGTC CATATTCTAT GTTTCCCTTG AAGATCATCT GATGCGCCTC TTTGCCACAG AAAAGATTGC ATCATTGATG GATCGTTTAG GTTTCAAGGA AGGAGAAGTG CTCGAAAACA ACATGCTGAG TAAGTCCGTG GAGCGTGCTC AAAAGAAGGT GGAAGAGAAC AACTTCGGTA TCCGTAAACA TCTGCTTGAG TACGATGATG TAATGAATTC GCAGCGTGAA GTCATTTATA CCCGTCGCCG TCATGCTTTG ATGGGAGAGC GTATCGGTAT GGATGTACTC AATACCATAT ACGACGTATG TAAGGCTCTG ATTGACAATT ATGCAGAAGC CAATGATTTC GAAGGCTTCA AGGAAGATCT GATGCGTGCA CTCGCGATAG AATCTCCTAT CACGCAAGAA ATATTCAGAG GTAAGAAAGC AGAAGAGCTG ACCGATATGC TTTTCGATGA AGCTTACAAG TCTTTCCAAC GTAAGATGGA TCTGATCGCA GAAGTGGCCC ACCCTGTGGT TCATCAGGTA TTCGAGACCC AAGCCGCCGT GTACGAGCGC ATTCTAATCC CCATTACGGA TGGTAAACGT GTCTATAACA TAGGATGCAA TTTGCGTGAA GCGGATGAAA CTCAAGGGAA AAGCATCATC AAAGAATTTG AGAAAGCTAT CGTACTGCAT ACTATCGATG AGTCTTGGAA AGAACATCTG CGTGAGATGG ACGAGCTTCG TAATTCCGTT CAGAATGCCA GCTACGAAAA CAAAGATCCA CTACTTATCT ATAAACTCGA ATCTTACGAA CTGTTCCGCA AGATGGTAGA AGCCATGAAC CGTAAGACCG TAGCGATCCT AATGCGTGCT CGGATACCGG TACCGGAGGC TCCTTCCCAA GAAGAGCTGG AACACAGGCG GCAAATAGAA ATCCGACATG CAGCCGAACA ACGTACGGAC ATGAGTAAGT ATCGGACACA AAAAGACGAT ATAGAAGCCC AGCAGAAAGC ACAAAGGGAT GCGGCAAGCA GACCTCAGGG TGCAGCTGCT CCCCAGACAC CGATAAGAAA CGAGAATAAG ATCGGGCGAA ACGATCCTTG TCCTTGCGGT AGTGGCAAAA AGTTCAAACA GTGCCACGGG CGTAACCTGT AA
|
Protein sequence | MGFNEFMSKL FGNKSQRDLK EVKPFVDKIK VAYGEIERLS DDDLRGRTAI LRQKIQDYVK DERAEIDKLK VEVEGKDLDE REEIWAQVDK LEKEILDKME VVLDEILPEA FAIIKDTARR FAQNETIRVK ATDLDRDLAI NHDFVSIEGD TAVYQNHWVA GGNEILWDMI HYDVQLIGGT VLHKGKIAEM ATGEGKTLVA TLPVFLNALT GNGVHVVTVN DYLSKRDSEW MGPLYMFHGL TVDCIDKHQP NSDARRKAYN ADITFGTNNE FGFDYLRDNM ATSPKDLVQR KHNYAIVDEV DSVLIDDART PLIISGPTPK GEDQLFEEFL PNVEKVVEAQ RKLCSQLLID AKNKMASEDK KEQEEGSLLL FRSFKGLPKN KQLIKYLSEP GIKSSMLKTE EAYMAENMRN MHLVTDELYF IIDEKRNSVE LTEKGIDLLT SRTDDPKFFV LPDIAAELSA LDNMESDAEK RREAKDEIIA NYSIKSERVH TVNQLLKAYA LFEKDDQYVV MDNKVLIVDE QTGRIMDGRR YSDGLHQAIE AKEHVKVEAA TQTFATITLQ NYFRMYHKLA GMTGTAETEA GELWDIYKLD VVVIPTNKPI ARKDMNDRIY KTAREKYAAV IEEIVRLVEE GRPVLVGTTS VEISELLSRM LRLRGIQHNV LNAKLHQKEA EIVAQAGQKG TVTIATNMAG RGTDIKLSAE VKKAGGLAII GTERHESRRV DRQLRGRSGR QGDPGSSIFY VSLEDHLMRL FATEKIASLM DRLGFKEGEV LENNMLSKSV ERAQKKVEEN NFGIRKHLLE YDDVMNSQRE VIYTRRRHAL MGERIGMDVL NTIYDVCKAL IDNYAEANDF EGFKEDLMRA LAIESPITQE IFRGKKAEEL TDMLFDEAYK SFQRKMDLIA EVAHPVVHQV FETQAAVYER ILIPITDGKR VYNIGCNLRE ADETQGKSII KEFEKAIVLH TIDESWKEHL REMDELRNSV QNASYENKDP LLIYKLESYE LFRKMVEAMN RKTVAILMRA RIPVPEAPSQ EELEHRRQIE IRHAAEQRTD MSKYRTQKDD IEAQQKAQRD AASRPQGAAA PQTPIRNENK IGRNDPCPCG SGKKFKQCHG RNL
|
| |