Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0324 |
Symbol | hutH |
ID | 2551871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 357679 |
End bp | 359172 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637149106 |
Product | histidine ammonia-lyase |
Protein accession | NP_904639 |
Protein GI | 34540160 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGTA CCTCTTTTCA AGTTGGTTCC GAACCGCTCT CTCTGGATCT GCTTCGCGAA TATCTGGATA GTCGCTTCAA GCTGGAACTC TCAGCCGATG CCGTAAGACG TATCGAGCAC TGCCGCCACT ATCTGGACGA GAAAGTGAAG CAGTCGGACA AACCCATATA CGGCGTGACC ACCGGCTTCG GCTCTCTCTG CAACAGGACA ATTACACCGG ATCAGCTTAC CGCCTTACAG GAGAACCTCG TCAAGAGTCA TGCCTGTAGC TGCGGCACGC CCGTTCATGA GGACATCGTG CGCCTGATGC TTCTGCTCAA AGCTCATGCC CTCCAGTTGG GACACAGTGG CGTACAGCTA TGCACCGTGC AGCGTATCCT GGACATGCTC AATAACGACG TACTCCCCAT CGTTTACGAT CGCGGTTCGC TCGGCGCATC GGGCGACCTC GCCCCTCTGG CCAATCTCTT CCTGCCGCTT ATAGGTGAGG GAGAAGTCAT GTACAAGGGA GAGAAGCGCA ATGCCTGCGA TGTGATGCAG GAGTTCGGCT GGAAGAAGAT CATCCTCAAG AGCAAAGAAG GCTTGGCTCT GCTCAATGGT ACGCAGTTCA TGAGCAGTCA TGGCGTCTAC GCCCTCCTCA AGGCACACCG TCTTGTAGAG GTAGCAGACT GTATCGGTGC ACTCTCGCTC GAAGCTTTCG ATGGCTTGGA TGCCCCCTTT ACCGACAACC TCCACATCAT ACGTCCTCAC CCCGGACAGT TGGCCGTAGC TCGTCACCTG AAGGAAGTTC TTAAAGGTAG CGAGCAGATA GCCCGCCCGA AGAAGCAGGT ACAGGATCCG TACAGCTTCC GCTGTATGCC GCAGGTTCAC GGAGCCAGCC GCGATGCCAT TGCCTACGTT ACAGAGGTAG TCATTCGAGA GATCAACTCC GTGACCGACA ATCCCACGGT CTTCCCCGAT GAAGATCTTG TCGTATCGGG TGGTAACTTC CACGGCCAAC CTCTTGCCAT CGTATATGAT TTTCTGGCTA TAGCCTTGGC TGAACTGGGC AATATCAGCG AACGTCGCAC GGCTCAGCTC ATACTCGGTC TGCGCAATCT GCCTGAGTTC CTCGTAGCCA ATCCCGGTCT GAACAGCGGA TTCATGATAC CGCAGTATGC AGCCGCAGCT ATGGTGAGCA AGAACAAGAT GTACTGTTTC TCCGCAGCCA GCGATAGTAT CGTCAGCAGC AACGGGCAGG AAGACCACGT TTCTATGGGA GCTAACGCAG CAACGAAGCT GCTTCCGATC ATAGAAAACC TGGAGATGAT CTTCGCCATC GAACTCCTCG ATGCGGCCCA AGCCTTCGAA TTCCGCCGTC CGACCAAGAC GTCTCCGTTC TTGGAGAAGA TGCTCGGCGA GCTGCGCAAG GTAGCTCCCA AGGTGGAGGA CGATGTAGTC ATGTACAAAC AGATACAGGC AGCCACGGAG TTCGTTCGCG AATATGCTTT CTAA
|
Protein sequence | MARTSFQVGS EPLSLDLLRE YLDSRFKLEL SADAVRRIEH CRHYLDEKVK QSDKPIYGVT TGFGSLCNRT ITPDQLTALQ ENLVKSHACS CGTPVHEDIV RLMLLLKAHA LQLGHSGVQL CTVQRILDML NNDVLPIVYD RGSLGASGDL APLANLFLPL IGEGEVMYKG EKRNACDVMQ EFGWKKIILK SKEGLALLNG TQFMSSHGVY ALLKAHRLVE VADCIGALSL EAFDGLDAPF TDNLHIIRPH PGQLAVARHL KEVLKGSEQI ARPKKQVQDP YSFRCMPQVH GASRDAIAYV TEVVIREINS VTDNPTVFPD EDLVVSGGNF HGQPLAIVYD FLAIALAELG NISERRTAQL ILGLRNLPEF LVANPGLNSG FMIPQYAAAA MVSKNKMYCF SAASDSIVSS NGQEDHVSMG ANAATKLLPI IENLEMIFAI ELLDAAQAFE FRRPTKTSPF LEKMLGELRK VAPKVEDDVV MYKQIQAATE FVREYAF
|
| |