| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0309 |
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| Symbol | apbE |
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| ID | 2551699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 344100 |
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| End bp | 345113 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637149092 |
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| Product | thiamine biosynthesis lipoprotein ApbE |
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| Protein accession | NP_904625 |
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| Protein GI | 34540146 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.912952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGTT GGTCAGGTTT AGCGGCCGTT CCGGGGATGA TCATTCTCGG TGCGGCCTTT
TTTTCTTGCC GGAAAGCACC TGCCTATACG GTATTGCAGG GGGAGATATT CCATACCTAT
TATCATATCA AATATAAGGG AGAGGCAGAT CATTCGCAGC GAGTGGATAG CGTATTCAGA
GCTTTCAATC ATTCCCTTAA TCCGTTCGAC AGTACCAGTA TCATTGCCGG AGTGAATCGG
AATCTTCCGG TCAGGACTGA CAGTATGTTC CGCCGGGTAT TTCGTCGGGC GCAGGAGATT
GCAGCCGTTT CCGGCGGCTC TTACGATATT ACTTGCTCTC CGCTGATCAA TGCTTGGGGT
TTCGGTTTCG AACATAAAGA GGACGTGACT GCACAGTTGA TCGACAGCAT CAGGGCCTTT
GTCGGTTACC GGAGGGTACG ATTGGATGGC GAGACGGTTG TTAAGGATGA TCCGCGCACT
ACGCTGAACA CCTCTTCCAT CGCCAAAGGA TATGCTTCGG ATCTGGTGGG CGAAGCCTTG
GCTGCTCATG GGATCGGGGA CTATATGGTA GAGATCGGTG GAGAGGTTGC TTTCAATGGC
CTCAATCCTC AAGGCAAGCC TTGGCGCATA GGTGTAAGTA AACCGCAGGA TGACAGTCTG
GGCTTGGCGA TGCAGGAGTT CGAACTCGTC GTAGAGCTTA GTGGGAAAGG GGGCTTGGCG
ACATCGGGCA ACTACCGGAA TTTCTATGTT CGGGATGGGA AGAAGTATGC ACATACGATC
GATCCGCTTA GCGGCTATCC TGTGCAGACG GATGTGCTGA GTGCCACAGT CATTGCTCCC
GATTGTATGA CGGCTGATGC CTTGGCTACT ACTTTTATGG TGGTCGGTTC GGAGCGTGTG
CCTGCTATTG CCGCCGAATT CCCCGGTGTG GACTATATGC TTATTTTGTC CGATGGAGAC
GGTTCTTATA AGACTGTGAT GAACGAAGGC TTCCGGAAAC GAGTAGCCAA GTAA
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| Protein sequence | MKRWSGLAAV PGMIILGAAF FSCRKAPAYT VLQGEIFHTY YHIKYKGEAD HSQRVDSVFR
AFNHSLNPFD STSIIAGVNR NLPVRTDSMF RRVFRRAQEI AAVSGGSYDI TCSPLINAWG
FGFEHKEDVT AQLIDSIRAF VGYRRVRLDG ETVVKDDPRT TLNTSSIAKG YASDLVGEAL
AAHGIGDYMV EIGGEVAFNG LNPQGKPWRI GVSKPQDDSL GLAMQEFELV VELSGKGGLA
TSGNYRNFYV RDGKKYAHTI DPLSGYPVQT DVLSATVIAP DCMTADALAT TFMVVGSERV
PAIAAEFPGV DYMLILSDGD GSYKTVMNEG FRKRVAK
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