| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0272 |
|---|
| Symbol | |
|---|
| ID | 2551961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 304539 |
|---|
| End bp | 305798 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637149060 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | NP_904593 |
|---|
| Protein GI | 34540114 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | [TIGR03520] gliding motility-associated protein GldE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTTTCA TTATCGACCT GCTTCTTCTT TGCTGTTCGG CTTTTATGTC CTCCTGTGAG
GTGGCTTATT TTTCACTAAA GCCGATCGAT CTGCAGAACA TCCGCGAACG GAATCACTCT
TCCGACATCG CGCTTTCCAA TTTATTAGAC AATTCGAATC AGCTATTAGC TACTATTCTG
ATCGGGAATA ATGTGATTAA TGTAGCCATC GTTATCCTTT CCAATTATGC CATCGAGCAG
ACATTCGTTT TCTCTTCTCC GATCATTGGA TTTCTGATCC AGACGATACT CCTGACCACT
GTTCTTTTGC TGTTCGGAGA GATTCTGCCG AAAGTGTATG CGCGGAAGAA TCCGCTGCAA
TACTCGCGCT TTTCTGCTGC AGCTATGTCC GTTATCTATA AGATATTGTC ACCGTTTTCA
AAATTGCTGG TCAAAAGTAC CGGCATCGTT ACCAGAGGTA TCAGCAAGAA GAAATACGAT
ATGTCCGTGG ATGAGCTCTC GAAAGCGGTA GCCCTCACCA CTACGGAGGG AGAGCCGGAG
GAGAAAGAAA TGATTAACGA AATCATCAAA TTCTATAATA AGACAGCCTG CGAAATCATG
GTTCCGCGTA TCGATATTGT GGATGTGGAT CTGAGCTGGC CATTTCGTAA GATGCTTGAC
TTCGTTGTTT CGTCGGGTTA TTCCAGACTT CCCGTTTCAG AGGGGTCAGA AGACAATATC
AAAGGGGTGA TTTACATCAA AGATCTAATC CCACACATGG ATAAAGGCGA TGAATTCGAC
TGGCATCCTC TGATTCGTAA AGCATATTTT GTCCCCGAAA ACAAGCGCAT AGATGATTTG
CTCGAGGAGT TCAGAGCCAA TAAGGTGCAT GTCTCCATCG TTGTGGATGA GTTCGGTGGC
ACTTGCGGAC TGATCACAAT GGAGGACATA TTGGAAGAGA TCGTCGGCGA GATTACGGAC
GAGTACGATG AGGAAGAACT CCCCTTTAAG GTTTTGGGGG ATGGCAGTTA TCTTTTCGAA
GGAAAAACGT CTCTCTCCGA TGTTCGACAC TATCTTGACC TTCCGGAAAA TGCTTTCGGT
GAATTGGGGG ACGAGGTAGA TACGCTAAGT GGGCTCTTCT TGGAAATCAA GCAGGAACTC
CCCCATGTGG GCGATACAGC AGTGTACGAG CCATTCCGCT TTCAAGTGAC CCAAATGGAC
AAGCGCCGAA TCATCGAAAT CAAGATTTTC CCTTTCGAGC GCACTTGGGA GGTCGAATAG
|
|---|
| Protein sequence | MAFIIDLLLL CCSAFMSSCE VAYFSLKPID LQNIRERNHS SDIALSNLLD NSNQLLATIL
IGNNVINVAI VILSNYAIEQ TFVFSSPIIG FLIQTILLTT VLLLFGEILP KVYARKNPLQ
YSRFSAAAMS VIYKILSPFS KLLVKSTGIV TRGISKKKYD MSVDELSKAV ALTTTEGEPE
EKEMINEIIK FYNKTACEIM VPRIDIVDVD LSWPFRKMLD FVVSSGYSRL PVSEGSEDNI
KGVIYIKDLI PHMDKGDEFD WHPLIRKAYF VPENKRIDDL LEEFRANKVH VSIVVDEFGG
TCGLITMEDI LEEIVGEITD EYDEEELPFK VLGDGSYLFE GKTSLSDVRH YLDLPENAFG
ELGDEVDTLS GLFLEIKQEL PHVGDTAVYE PFRFQVTQMD KRRIIEIKIF PFERTWEVE
|
|---|
| |