Gene PG0254 details

Gene Information

• Locus tag: PG0254
• Symbol: nusA
• ID: 2551971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 285252
• End bp: 286586
• Gene Length: 1335 bp
• Protein Length: 444 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637149045
• Product: transcription elongation factor NusA
• Protein accession: NP_904578
• Protein GI: 34540099
• COG category: [K] Transcription
• COG ID: [COG0195] Transcription elongation factor
• TIGRFAM ID: [TIGR01953] transcription termination factor NusA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAAGA AGCAAGAGAC GATCAGCATG ATAGAATCGC TGGCAGAATT CAAAGAGCTG 
AAAAACATTG ACAAAGAGAC GATGATCAAC GTCCTGGAGG ATTCCTTCCG GAACGTTCTG 
GCAAAAATCT TCGGATCGGA CGACAACTTC GACGTAATCA TCAATCCGGA GAAAGGCGAC 
TTCGAAATAT GGCGCACCCG TCAGGTAGTA GAGGACGGTG CCGTAGAGGA CGAAAGTCGC 
GAAGTGTCTC TGTCGGATGC TCACGAGATC GACCCCGAGG CGGAGGTCGG TGAGGAAGTA 
ACGGACTCCG TGAACTTCGC TTCATTCGGT CGCCGTGCCA TTCTCAATCT TCGCCAAGCT 
CTCTCCAGCA AGATTATGGA GCTTCAGAAG GAAAACCTGT TCAATACATT CACGGAACGT 
ATCGGGCAGC TCATTTCGGC TGAAGTATAT CAGGTATGGA AGCGTGAGGC TCTGCTTATC 
GACGACGACG GCAACGAACT CCTGATGCCG AAGAGCGAGC AGATCCCAAG CGACTTTTTC 
CGCAAAGGTG AGACCGTTCA CGCCGTTGTG GAGCGCGTGG AGAACGCCAA CAACAATCCC 
AAGATCATCG TATCGCGTAC AAGCGGAGAG TTCCTCAAGA GGCTTTTCGA GCTGAATGTA 
CCGGAGATTG CCGATGGCCT GATCACCATC CGCTGCGTAG CCCGTATCCC GGGAGAGAGG 
GCCAAGATGG CCGTAGAGTC TTACGACGAT CGTATCGACC CCGTAGGAGC CTGTGTGGGT 
ATGAACGGTT CGCGCATACG AGGTATCGTG CGCGAACTGA GAGGCGAGAA TATCGACGTT 
ACGCAGTACA CGACGAACAC CGCCCTCTTC ATCCAGCGGG CACTCAGCCC TGCACGTATA 
TCTTCGATTC GCCTGCTCGA AGCAGAGCAT AAGGCCGAAG TATTCCTGCG CCCCGAAGAA 
GTGCCTTTGG CCATCGGAAA GAATGCCTCG AATATCAAGC TGGCATCGGG GCTGACGGGT 
TATCAGATCG AAGTGTTCCG TGACATAGAC GATATGGACG AAGAAGACAT CTATCTGGAC 
GAATTCAACG ACGAGATCGA CCAGTGGATC ATCGACCTGT TCAAGAATAT CGGTTGCAAT 
ACGGCCAAGA GCGTGCTCAG CAAGAACAGA GAAGATCTGA TCAAAGAGAC GGATTTGGAA 
GACTCCACCA TAGACTATGT ACTCGGAGTC CTGAGTGCCG AATTTGCCGA TGAGGATCAG 
GTGACTGATA ATCAAAGTAC CGATTCGGAT GATTTGGACA ATTTCTCTGC CGAAGACGAT 
CTGAAGCAAG AGTAA 

 

Protein sequence

MAKKQETISM IESLAEFKEL KNIDKETMIN VLEDSFRNVL AKIFGSDDNF DVIINPEKGD 
FEIWRTRQVV EDGAVEDESR EVSLSDAHEI DPEAEVGEEV TDSVNFASFG RRAILNLRQA 
LSSKIMELQK ENLFNTFTER IGQLISAEVY QVWKREALLI DDDGNELLMP KSEQIPSDFF 
RKGETVHAVV ERVENANNNP KIIVSRTSGE FLKRLFELNV PEIADGLITI RCVARIPGER 
AKMAVESYDD RIDPVGACVG MNGSRIRGIV RELRGENIDV TQYTTNTALF IQRALSPARI 
SSIRLLEAEH KAEVFLRPEE VPLAIGKNAS NIKLASGLTG YQIEVFRDID DMDEEDIYLD 
EFNDEIDQWI IDLFKNIGCN TAKSVLSKNR EDLIKETDLE DSTIDYVLGV LSAEFADEDQ 
VTDNQSTDSD DLDNFSAEDD LKQE