| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0121 |
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| Symbol | hup-1 |
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| ID | 2552529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 144608 |
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| End bp | 144874 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637148932 |
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| Product | DNA-binding protein HU |
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| Protein accession | NP_904465 |
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| Protein GI | 34539986 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00022412 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACAAGA CAGATTTTAT TGCAGCTGTA GCTGAAAAGG CCAACCTCAC AAAGGCTGAT
GCCCAGAGAG CAGTAAATGC ATTTGCAGAA GTTGTAACAG AACAGATGAA TGCCGGAGAG
AAAATCGCTC TCATCGGATT CGGTACTTTC TCAGTGAGCG AGCGTGCTGC TCGCAAAGGC
ATTAATCCTA AGACGAAAAA ATCTATTTCT ATCCCTGCCC GTAAGGTTGT TCGTTTCAAA
CCGGGCTCTA CTTTGGAACT TAAGTAA
|
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| Protein sequence | MNKTDFIAAV AEKANLTKAD AQRAVNAFAE VVTEQMNAGE KIALIGFGTF SVSERAARKG
INPKTKKSIS IPARKVVRFK PGSTLELK
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