Gene PG0108 details

Gene Information

• Locus tag: PG0108
• Symbol: epsD
• ID: 2552211
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 130241
• End bp: 131449
• Gene Length: 1209 bp
• Protein Length: 402 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637148920
• Product: UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
• Protein accession: NP_904453
• Protein GI: 34539974
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase
• TIGRFAM ID: [TIGR03026] nucleotide sugar dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 3
• Fosmid unclonability p-value: 0.0000051071
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAGAAAAG CTTGTTTCAT GGGCCTGGGG TATATAGGTC TGCCAACGGC AATTGTAACT 
GCCAAAAGTG GAATAGAAGT ATTAGGGGTA GATATAAACA CCAATATCGT TGCAAAAACC 
AATTCAGGAA AATTGCACTT TGTGGAAGCA GGTATGGAAG ATCTTTTACA GGAAGTTATA 
CAAAAAGAAA CATTCCGTGC TTCTACAACA CCGGAGGATA GCGATGTTTA TCTGGTTGTG 
GTGCCTACAC CCTTCAAGGC CAATCATGAG CCGGACATTA CATGTGTAGA GGCTGCAACA 
AGATCAATAC TTCCCTTGCT CAAGAAGGGC GATTTATTTA TTATCGAATC TACCTCTCCG 
ATAGGAACAA CAGAGCAGAT GGCTGATCTA ATCTATCGAG AGCGTCCCGA ACTTAAAGAC 
CAATTATATA TGGCTTACTG TCCGGAACGT ATCCTTCCCG GTAATGTTAT TTATGAACTG 
GAGCACAACG ATCGGGTCAT CGGGGGCTTA AGCGCAGAAG CGACCGAACG GGCAAAAGAG 
TTCTATGCTC ATTTTGTTAA AGGAACCTTG CATGGAACTA ATGCTCGTAC AGCAGAACTC 
TGCAAGCTTA CAGAGAATGC TAGCCGAGAT GTACAGATCG CGTTTGCCAA CGAACTTTCT 
TTCATTTGTG ACAAAGCCGG AATCAATGTG TGGGAACTTA TCGAACTGGC CAATAAGCAT 
CCAAGGGTGA ATATTCTTCA GCCCGGTAGT GGAGTAGGGG GGCATTGTAT TGCGGTGGAT 
CCGTATTTTA TCTCTTCGGC TTTCCCTCTG GAGAGTAAAC TGATTGCCGG TGCTCGTGAA 
ATCAATAACT ACAAGGCTTT TTGGTGTGCC GAGAAAATAA GTAAGGCTAT TCAAGACTTT 
GAGATACGAC ATGGCCATAC TCCAGTAGTA GCTATGATGG GACTGGCCTT TAAACCGGAC 
ATCGATGATC TCAGGGAGTC GCCTGCAAAA TACATTGCCA CTCGAGTAAT GCAGGGGTTG 
AACAAAGCCG AGATCTTGAT TGTAGAACCC AACATTTCGA AGCATAATAC TTTCAAGCTA 
ACGGACTACC GTGATGCTTA TGAGCAGGCA GACATTGTAG CTTTCTTAAC GGCTCATACT 
CCTTTCAAAT TCCTCGAATA CCGAACCGAC AAAGTCATCC TCGACTTCTG TGGTGTCTTC 
AAAAAATAA 

 

Protein sequence

MRKACFMGLG YIGLPTAIVT AKSGIEVLGV DINTNIVAKT NSGKLHFVEA GMEDLLQEVI 
QKETFRASTT PEDSDVYLVV VPTPFKANHE PDITCVEAAT RSILPLLKKG DLFIIESTSP 
IGTTEQMADL IYRERPELKD QLYMAYCPER ILPGNVIYEL EHNDRVIGGL SAEATERAKE 
FYAHFVKGTL HGTNARTAEL CKLTENASRD VQIAFANELS FICDKAGINV WELIELANKH 
PRVNILQPGS GVGGHCIAVD PYFISSAFPL ESKLIAGARE INNYKAFWCA EKISKAIQDF 
EIRHGHTPVV AMMGLAFKPD IDDLRESPAK YIATRVMQGL NKAEILIVEP NISKHNTFKL 
TDYRDAYEQA DIVAFLTAHT PFKFLEYRTD KVILDFCGVF KK