| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0086 |
|---|
| Symbol | |
|---|
| ID | 2551986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 100635 |
|---|
| End bp | 102449 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637148897 |
|---|
| Product | DEAD-box ATP dependent DNA helicase |
|---|
| Protein accession | NP_904435 |
|---|
| Protein GI | 34539956 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.389821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT TTGAAGAATT AGGCATTGCC AAACCGTTTT TGAAAGCAAT TGCCGAATTG
GGCTTCGAAC AGCCCATGCC TGTGCAGGAA GAAGTAATAC CCTATCTCCT CGGAGAGGAC
ATCGACCTGA TCGCTTTGGC ACAGACCGGC ACAGGCAAGA CTGCCGCTTT CGGCCTTCCG
CTGCTCCAGA AAATTGATTT GTCGGGAGGA CGACCGCAGG CTTTGGTACT CTGCCCGACT
CGCGAACTGT GTCTACAGAT AGCAGACGAC TTGAACAGCT ATTCCAAGTA TTTGTCCGAT
GTGCACATCC TACCCGTTTA CGGAGGTACG CCTATAGATG CGCAGATCAG AGCCTTGCGC
CGTGGTGTGC AAATCGTCGT GGCAACGCCC GGCCGTCTCC TCGACCTGAT GCGCCGTGAG
GCCGTCAGCC TGTCGGACAT TCATACGGTA GTATTGGATG AAGCGGATGA AATGCTCAAT
ATGGGCTTTG CAGAAGATCT GGAGCAAATC CTCGCAGATA TTCCATCCGA ACGCCATCTG
CTATTGTTTT CGGCTACGAT GCCCAAAGAG ATCTCCAAGA TCGCCACTTC GTACATGAAG
GACCCCAAGG AAATTGTTAT CGGCAATAAG AATGAGGGCA ATGCCAATAT CAAGCATCTA
TACTACATGG TCTCGGCGCG CCATAAATAT CTTGCGCTAA AGCGAATTGC CGACTACTAT
CCCAATATCT ATGGTATTGT TTTCTGTCGC ACCCGTAAGG AAACGCAGGA GATTGCCGAT
CAACTGATTC AAGACGGCTA TAACGCGGAT TCTCTTCATG GCGATCTCAG TCAGGCTCAG
CGCGACTATG TGATGCAGAA GTTTCGCGTC CGCAACCTTC AACTGCTCGT TGCCACCGAT
GTGGCTGCCC GCGGATTGGA TGTGAACGAT CTGACCCATG TGATTCACTT CGGTCTTCCC
GATGATGTAG AGAGCTACAC CCACCGCAGC GGTCGTACAG CTCGTGCAGG GAAAACAGGT
CTTTCGATCG CCATCTGCCA TGTCAAGGAG AAAGGCAAAA TCAAGAATAT AGAGCGCACG
ATGCAGAAGC AGATCGAACG TGCACGCATC CCTTCCGGAG CAGAGATATG CGAAAAGCAA
CTGTTCAATC TGGCCGATCG TATAGAACGT GTGGATATAG AGAACACAAC GGCCATCGAC
TCTGTCTTGA ACGAAGTGAA CAAGAAGCTC GAATGGATTG AAAAAGACGA ATTGATTCGT
CGGGTAATGG CATTGGAGTT CAATCGCATG CTCGACTATT ACCAACGTGC CGAAGACGTG
GAAGAAGTGG TCGAGAGAAA AAAAGACGAG GTTTCGGGAG ATCGTAAAAA CCGAAAACGA
GGAGCCGGCG AAGCAGAAGA AGGGATGACC CGTCTGTTCA TCAATTTTGG CAAGATGGAT
CAAATGTTTC CCAACCGACT GATCGAGCTG ATCAACCGTT GTATCCCGGG GCGTGTCAAT
ATCGGACGGA TCGACCTGAT GCCCCGATTC GCTTTCTTCG ATGTAGACGA GTTCGAAGCC
AAGAACGTAG TAGAAACCCT CAATCGGTAC GAAGTGGATG GTCGCCGCAT CCATGTAGAG
TATGCGGATA CCAAGAAAGA CTATGCCGGG GGGAAAAAAG GCGGAGATAA GAACTTTTCC
GCTCGTCGCA AAGATTTCGA CGGGCGACGT AGTGAAAATC CCACTTCACG CAAAAACAAA
GGTCGCAAAG AGAAACCGAC GGAAGGACGT TTCTACGACA AGTTCGACTC CAAACAGCGC
AAGCGTCGGA AGTAA
|
|---|
| Protein sequence | MKTFEELGIA KPFLKAIAEL GFEQPMPVQE EVIPYLLGED IDLIALAQTG TGKTAAFGLP
LLQKIDLSGG RPQALVLCPT RELCLQIADD LNSYSKYLSD VHILPVYGGT PIDAQIRALR
RGVQIVVATP GRLLDLMRRE AVSLSDIHTV VLDEADEMLN MGFAEDLEQI LADIPSERHL
LLFSATMPKE ISKIATSYMK DPKEIVIGNK NEGNANIKHL YYMVSARHKY LALKRIADYY
PNIYGIVFCR TRKETQEIAD QLIQDGYNAD SLHGDLSQAQ RDYVMQKFRV RNLQLLVATD
VAARGLDVND LTHVIHFGLP DDVESYTHRS GRTARAGKTG LSIAICHVKE KGKIKNIERT
MQKQIERARI PSGAEICEKQ LFNLADRIER VDIENTTAID SVLNEVNKKL EWIEKDELIR
RVMALEFNRM LDYYQRAEDV EEVVERKKDE VSGDRKNRKR GAGEAEEGMT RLFINFGKMD
QMFPNRLIEL INRCIPGRVN IGRIDLMPRF AFFDVDEFEA KNVVETLNRY EVDGRRIHVE
YADTKKDYAG GKKGGDKNFS ARRKDFDGRR SENPTSRKNK GRKEKPTEGR FYDKFDSKQR
KRRK
|
|---|
| |