Gene PG0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0086 
Symbol 
ID2551986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp100635 
End bp102449 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content50% 
IMG OID637148897 
ProductDEAD-box ATP dependent DNA helicase 
Protein accessionNP_904435 
Protein GI34539956 
COG category[J] Translation, ribosomal structure and biogenesis
[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.389821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT TTGAAGAATT AGGCATTGCC AAACCGTTTT TGAAAGCAAT TGCCGAATTG 
GGCTTCGAAC AGCCCATGCC TGTGCAGGAA GAAGTAATAC CCTATCTCCT CGGAGAGGAC
ATCGACCTGA TCGCTTTGGC ACAGACCGGC ACAGGCAAGA CTGCCGCTTT CGGCCTTCCG
CTGCTCCAGA AAATTGATTT GTCGGGAGGA CGACCGCAGG CTTTGGTACT CTGCCCGACT
CGCGAACTGT GTCTACAGAT AGCAGACGAC TTGAACAGCT ATTCCAAGTA TTTGTCCGAT
GTGCACATCC TACCCGTTTA CGGAGGTACG CCTATAGATG CGCAGATCAG AGCCTTGCGC
CGTGGTGTGC AAATCGTCGT GGCAACGCCC GGCCGTCTCC TCGACCTGAT GCGCCGTGAG
GCCGTCAGCC TGTCGGACAT TCATACGGTA GTATTGGATG AAGCGGATGA AATGCTCAAT
ATGGGCTTTG CAGAAGATCT GGAGCAAATC CTCGCAGATA TTCCATCCGA ACGCCATCTG
CTATTGTTTT CGGCTACGAT GCCCAAAGAG ATCTCCAAGA TCGCCACTTC GTACATGAAG
GACCCCAAGG AAATTGTTAT CGGCAATAAG AATGAGGGCA ATGCCAATAT CAAGCATCTA
TACTACATGG TCTCGGCGCG CCATAAATAT CTTGCGCTAA AGCGAATTGC CGACTACTAT
CCCAATATCT ATGGTATTGT TTTCTGTCGC ACCCGTAAGG AAACGCAGGA GATTGCCGAT
CAACTGATTC AAGACGGCTA TAACGCGGAT TCTCTTCATG GCGATCTCAG TCAGGCTCAG
CGCGACTATG TGATGCAGAA GTTTCGCGTC CGCAACCTTC AACTGCTCGT TGCCACCGAT
GTGGCTGCCC GCGGATTGGA TGTGAACGAT CTGACCCATG TGATTCACTT CGGTCTTCCC
GATGATGTAG AGAGCTACAC CCACCGCAGC GGTCGTACAG CTCGTGCAGG GAAAACAGGT
CTTTCGATCG CCATCTGCCA TGTCAAGGAG AAAGGCAAAA TCAAGAATAT AGAGCGCACG
ATGCAGAAGC AGATCGAACG TGCACGCATC CCTTCCGGAG CAGAGATATG CGAAAAGCAA
CTGTTCAATC TGGCCGATCG TATAGAACGT GTGGATATAG AGAACACAAC GGCCATCGAC
TCTGTCTTGA ACGAAGTGAA CAAGAAGCTC GAATGGATTG AAAAAGACGA ATTGATTCGT
CGGGTAATGG CATTGGAGTT CAATCGCATG CTCGACTATT ACCAACGTGC CGAAGACGTG
GAAGAAGTGG TCGAGAGAAA AAAAGACGAG GTTTCGGGAG ATCGTAAAAA CCGAAAACGA
GGAGCCGGCG AAGCAGAAGA AGGGATGACC CGTCTGTTCA TCAATTTTGG CAAGATGGAT
CAAATGTTTC CCAACCGACT GATCGAGCTG ATCAACCGTT GTATCCCGGG GCGTGTCAAT
ATCGGACGGA TCGACCTGAT GCCCCGATTC GCTTTCTTCG ATGTAGACGA GTTCGAAGCC
AAGAACGTAG TAGAAACCCT CAATCGGTAC GAAGTGGATG GTCGCCGCAT CCATGTAGAG
TATGCGGATA CCAAGAAAGA CTATGCCGGG GGGAAAAAAG GCGGAGATAA GAACTTTTCC
GCTCGTCGCA AAGATTTCGA CGGGCGACGT AGTGAAAATC CCACTTCACG CAAAAACAAA
GGTCGCAAAG AGAAACCGAC GGAAGGACGT TTCTACGACA AGTTCGACTC CAAACAGCGC
AAGCGTCGGA AGTAA
 
Protein sequence
MKTFEELGIA KPFLKAIAEL GFEQPMPVQE EVIPYLLGED IDLIALAQTG TGKTAAFGLP 
LLQKIDLSGG RPQALVLCPT RELCLQIADD LNSYSKYLSD VHILPVYGGT PIDAQIRALR
RGVQIVVATP GRLLDLMRRE AVSLSDIHTV VLDEADEMLN MGFAEDLEQI LADIPSERHL
LLFSATMPKE ISKIATSYMK DPKEIVIGNK NEGNANIKHL YYMVSARHKY LALKRIADYY
PNIYGIVFCR TRKETQEIAD QLIQDGYNAD SLHGDLSQAQ RDYVMQKFRV RNLQLLVATD
VAARGLDVND LTHVIHFGLP DDVESYTHRS GRTARAGKTG LSIAICHVKE KGKIKNIERT
MQKQIERARI PSGAEICEKQ LFNLADRIER VDIENTTAID SVLNEVNKKL EWIEKDELIR
RVMALEFNRM LDYYQRAEDV EEVVERKKDE VSGDRKNRKR GAGEAEEGMT RLFINFGKMD
QMFPNRLIEL INRCIPGRVN IGRIDLMPRF AFFDVDEFEA KNVVETLNRY EVDGRRIHVE
YADTKKDYAG GKKGGDKNFS ARRKDFDGRR SENPTSRKNK GRKEKPTEGR FYDKFDSKQR
KRRK