| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0048 |
|---|
| Symbol | |
|---|
| ID | 2551866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 59544 |
|---|
| End bp | 60647 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637148862 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | NP_904400 |
|---|
| Protein GI | 34539921 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGC AATGCGGTAT CGTCGGCCTG CCCAATGTGG GGAAATCGAC TCTTTTTAAT
TGTTTGTCCA ATGCCAAGGC ACAGTCTGCC AATTTCCCCT TCTGTACCAT TGATCCGAAC
GTCGGTGTAA TCACAGTGCC TGATGAGCGA CTGAATATCC TGGCCGATCT GTGCAAACCC
CAACGGCTGA TCCCAACCAC GGTAGAGATC GTAGATATTG CCGGTCTTGT CAAAGGCGCC
AGCAAGGGCG AAGGGTTAGG GAATAAATTC CTGGCCAATA TCCGTGAAAC GGATGCGATA
CTCCACGTGC TCCGATGCTT CGATGATGAC AATATCACAC ACGTGGACGG ATCCGTAGAT
CCTGTACGCG ACAAAGAAAT CATCGACACC GAGCTACAAC TGAAAGACCT TGAAACGATA
GAGAGTCGCA TACAGAAAGT CCAAAAGCAG GCACAAACAG GGGGCGACAA ACAAGCCAAG
CTGGCTTATC AAGTGCTCTC GAAATTCAAA GAAGCTCTTG ACGAAGGCAG GAATGCTCGC
AGCGTCAGTT TCGACACCAA AGACGAACAG CAAATAGCAC GCGAACTCTT TCTCCTGACG
GCCAAACCGG TCATGTACGT TTGCAATGTG GACGAAGCTT CTGCTCTTAG TGGCAACAAA
TATGTGGAAG CCGTTCGCGA AGCAGTCAAA AACGAAGATG CAGAAATCCT CGTCGTAGCA
GCCAAGATAG AGAGCGAGAT CGCCGAACTG GAGACATACG AAGAGCGGCA AATGTTCCTC
GAAGAGATCG GTCTGAAAGA ATCCGGCGTG AGCCGTCTGA TCAAAGCCGC TTATCACTTG
CTGAATCTTC AAACCTACTT TACGGCCGGG AGCGATGAGG TAAGGGCTTG GACATTCCTC
CGCGGAAGCA AAGCACCTCA GTGTGCCGGT ATCATCCACA CCGATTTTGA AAAAGGGTTT
ATCCGTGCCG AGGTCATCAA GTACAATGAC TTTGTCAGTC TTGGCAGCGA ACAAGCCGTG
AAAGAAGCCG GTAAGATGAG TGTTGAGGGA AAAGAATATG TTGTGCAGGA TGGCGACATC
ATGCATTTCC GCTTCAATGT CTGA
|
|---|
| Protein sequence | MSLQCGIVGL PNVGKSTLFN CLSNAKAQSA NFPFCTIDPN VGVITVPDER LNILADLCKP
QRLIPTTVEI VDIAGLVKGA SKGEGLGNKF LANIRETDAI LHVLRCFDDD NITHVDGSVD
PVRDKEIIDT ELQLKDLETI ESRIQKVQKQ AQTGGDKQAK LAYQVLSKFK EALDEGRNAR
SVSFDTKDEQ QIARELFLLT AKPVMYVCNV DEASALSGNK YVEAVREAVK NEDAEILVVA
AKIESEIAEL ETYEERQMFL EEIGLKESGV SRLIKAAYHL LNLQTYFTAG SDEVRAWTFL
RGSKAPQCAG IIHTDFEKGF IRAEVIKYND FVSLGSEQAV KEAGKMSVEG KEYVVQDGDI
MHFRFNV
|
|---|
| |