Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0028 |
Symbol | ispF |
ID | 2551764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 34003 |
End bp | 34491 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637148845 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | NP_904384 |
Protein GI | 34539905 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC CTTTTCGAAT AGGATTCGGT TTCGATGTAC ACCGCTTGTC CGAAGGTTAT CCTTTGTGGA TGGGCGGTGT TCGTCTGGAA CATTCCAAGG GCTTGGAGGG ACATTCCGAT GCCGATGTGC TCATTCATGC TATTTGTGAT GCCCTGCTGG GTGCTGCCGC TTTGCGTGAT ATCGGCTATC ACTTTCCTCC TTCGGATCCT CAATATAAGG GGATCGATAG TAAGATCCTG TTGGCTCGCG TTATGGAATT GGTGCGTTCA CAGGGTTATG AATTGGGTAA TATCGATGCT ACTATTGCGG CGGAACAGCC CAAACTGAAT CCACATATAC CGGATATGCA GCGTGTCTTG GCTGAGGTGA TACAGGTGGA GGTGTCGGAT ATTTCACTGA AAGCCACAAC GACGGAGAAA CTTGGCTTCA CAGGACGAGA GGAAGGCATT TCCGCCTATG CCGTGGCCTT GCTCATTGCT GCCGTCTGA
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Protein sequence | MKKPFRIGFG FDVHRLSEGY PLWMGGVRLE HSKGLEGHSD ADVLIHAICD ALLGAAALRD IGYHFPPSDP QYKGIDSKIL LARVMELVRS QGYELGNIDA TIAAEQPKLN PHIPDMQRVL AEVIQVEVSD ISLKATTTEK LGFTGREEGI SAYAVALLIA AV
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