Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0016 |
Symbol | |
ID | 2552746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 17087 |
End bp | 18436 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637148834 |
Product | sigma-54 dependent DNA-binding response regulator |
Protein accession | NP_904373 |
Protein GI | 34539894 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.420092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA GCGGCAATAT CATCGTGGTC GATGATAACA AACATGTACT GACGGCTTTG AAATTGCTCC TGACGGGGAG TTTCGAGACC GTGACGCTCC TACCTTCCCC CAAGACACTG CTTTCCACGA TCGTAGAGGT GCATCCGGAT GTACTCCTGC TGGATATGAA TTTTTCTACC GGCATCAATA CGGGTAATGA AGGATTATAT TGGCTGGATC AGGTCCGTAG CCGTTTCCCT GACCTCCCTG TGGTACTCTT TACCGCTTAT GCGGACATTC GTCTGGCAGT GGAAGCCTTG AAGCGTGGAG CAAGCGATTT CGTAGTCAAG CCGTGGAACA ACACCGAGCT GTTGGAGTCG CTTCGCATGG CGATGAATAA GGCCGCAAGC ACTCAAGTGA CGGCTACACC TAAAGAAGGC GATTCGGTAT TTCTCAGCAA AAGCAAGGCC ATGTGTGAGG TGTTGGAGCT GGCTGGTCGT ATCGGCGATA CTGCAGCCCA TGTCCTCATT ACGGGTGAGA ATGGTACCGG CAAGGGCGTT TTAGCCGAGT ATATCCATGC CCGTTCTCCT CGTAGCCGGC AGCCGATGCT GACTGTGGAT ATGGGAGCTT TGAGCGAGAC GCTGTTCGAG AGCGAACTGT TCGGCCATGT GAAAGGAGCC TTTACCGATG CCAAAAGCGA TCGCGCCGGC AAGTTCGAGA CGGCGTCCGG CGGCACGATC TTCATGGACG AGATTGGCAA TCTGAGCCTT GCCTTGCAAG CCAAGTTGTT GGCTGTACTA CAGCAAAAAG TGGTGACCCG TGTGGGCAGC AATACACCGA TCCCTGTGGA TGTTCGTGTC ATCTCTGCCA CGAATAGCGA TTTGCCCCTC TCCGTGGCAG AAGGCCGGTT TCGAGAAGAT TTGCTTTATC GTCTCAATAC GATTCATATC GAGATGCCGC CGCTACGTCG TCGCAGGGAA GATATAGTGC CGATGGCCGT ATTCTTCCTG CATCGTTATG CACGACAGTA TGGAAAAGAG GTGCCGGAAT TGACTCCCGA AGCAGAGGCC CTACTCTCCG ATTATCCGTG GCCGGGCAAT GTGCGTGAGC TTCAGCATTG CATAGAGAAG GCTGTGATCC TTAGCCGTAG CAGTAGCCTT TCTGCTGCGG ATCTGTCGTT GCCGAAGTCG GTCGATGCAC ATCCGACTGC TACCGGTGTA GCAAGCACTC CTCAGACGTT GGATGAAATG GAAAAGACCG CTATCGAGCA AGCCTTGGCA CGAAACGGCA GCAACCTTTC GAATGTGGCA AGGGAATTAG GCATCAGCCG CCAGACTCTG TATAATAAGA TGAAACGCTA CGGGCTGTAG
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Protein sequence | MKKSGNIIVV DDNKHVLTAL KLLLTGSFET VTLLPSPKTL LSTIVEVHPD VLLLDMNFST GINTGNEGLY WLDQVRSRFP DLPVVLFTAY ADIRLAVEAL KRGASDFVVK PWNNTELLES LRMAMNKAAS TQVTATPKEG DSVFLSKSKA MCEVLELAGR IGDTAAHVLI TGENGTGKGV LAEYIHARSP RSRQPMLTVD MGALSETLFE SELFGHVKGA FTDAKSDRAG KFETASGGTI FMDEIGNLSL ALQAKLLAVL QQKVVTRVGS NTPIPVDVRV ISATNSDLPL SVAEGRFRED LLYRLNTIHI EMPPLRRRRE DIVPMAVFFL HRYARQYGKE VPELTPEAEA LLSDYPWPGN VRELQHCIEK AVILSRSSSL SAADLSLPKS VDAHPTATGV ASTPQTLDEM EKTAIEQALA RNGSNLSNVA RELGISRQTL YNKMKRYGL
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