| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0010 |
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| Symbol | clpC |
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| ID | 2551760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 8915 |
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| End bp | 11494 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637148830 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpC |
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| Protein accession | NP_904369 |
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| Protein GI | 34539890 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.169656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATACG ACTTTACACA AACATTCCGC AACAGCCTGG AGTACAGCTA TCAGGAAGCA
ACCCGTCTCG GCGTCGTAGC CGTGACGCAA GATATGCTCG TACTCGGTAT CATTCGCGAC
GGAGACAATG GCGCGATCGA CATCATGCGG CACTATGGGA TCAACTTGTA CGAACTCAAA
CGGTTGATCG AGTTGGAAGC CATCGCCGAG AGTTTGCCTG CTTCGCCTGA GGGATCGCCC
ATCTTCACCC CTTCGGCTCG GGAGGCTATC GATGATGCCA CAGACATCTG TGCCGACATG
GAGGACGAGG CCGTCAGCCC GGTCCATCTG TTGCTGAGTA TCCTCAACTC GACACAGGAG
AGCTTAGTAC AAAAGATATT TATGAAACAA GGTATAAAAT ACGACACCAT CCTGTCGGAT
TACTTCGGAC AGCGCAACCC CTCCGAAGGG AAGTCTCCCT CCGAAATGGA GATCCTCGAC
GGGTACCAAG ACAACGACTT CGACGACGAA GAGGACGAAT CCTCTCCGCC TTCCGGGAAT
AGCGGGACAG GCGGAGGCTC CGGCGACGCC CCCGAACAGA ATACCGGCGG AGGCGATACT
ACCACCACGA CACGGAGTGG AGGCGACACG CCTGCACTGG ACACCTTCGG CACCGACATC
ACTGCCATGG CGGCAGCAGG CAAGCTCGAC CCGGTAGTGG GTCGGGAGCA GGAGATCGAA
AGGGTGATAC AGATACTCAG CCGGCGCAAA AAGAACAATC CGGTGCTCAT CGGCGAACCC
GGTGTAGGCA AGAGTGCCAT CGTGGAAGGA CTGGCCGAAC GCATCGTGAA CAGGAAGGTG
AGCCGTATTC TTTTCGACAA GCGGATCATC AGCCTCGATT TGGCTCAGAT GGTAGCCGGC
ACCAAATATC GCGGACAGTT CGAAGAGCGG TTGAAAGCCG TGCTCGATGA GCTGAAGAAG
AATCCGCAGA TCATCCTCTT CATCGACGAG ATACATACCA TCGTGGGAGC AGGCTCTGCA
GCCGGATCGA TGGATACGGC CAATATGCTC AAACCCGCTC TTGCCCGTGG ACAGGTACAG
TGCATCGGAG CCACTACGCT GGATGAGTAT CGTAAGAACA TAGAAAAGGA CGGAGCACTC
GAACGCCGCT TCCAGAAGGT GCCGATAGCC CCCTCGACTG CAGAAGAAAC GCTGACCATC
CTGCAAAACA TCAAAGAGAA ATACGAGGAC TATCACGGTG TACGCTATAC GGACGAAGCG
ATCAAAGCGG CAGTGGAACT GACCGATCGC TATGTATCCG ATCGTTTCTT CCCAGATAAG
GCGATAGATG CCATGGACGA GGCCGGCGCG AGCGTCCATA TCACCAATGT GGTGGCTCCG
AAAGAAATCG AGATACTGGA GGCCGAATTG GCATCGGTGC GAGAGAACAA GCTCTCGGCC
GTAAAGGCTC AGAACTACGA ACTGGCTGCC TCCTTCCGCG ATCAGGAGCG GCGCACTCAG
CAGCAGATAG CGGAAGAGAA GAAAAAATGG GAAGAGCAGA TGTCCAAGCA CCGCGAGACG
GTGGACGAGA ATGTAGTGGC GCATGTAGTG GCGTTGATGA CAGGCGTTCC GGCTGAGCGG
CTGAGCACGG GCGAAGGCGA ACGTCTGCGC ACGATGGCAG ATGATCTCAA GACCAAAGTA
GTAGGTCAGG ACACAGCCAT CGAAAAGATG GTGCATGCCA TCCAGCGCAA TCGTCTGGGA
CTTCGCAATG AAAAGAAACC GATCGGTTCT TTCCTTTTCC TCGGCCCCAC GGGGGTAGGC
AAGACCTATT TGGCCAAGAA GCTCGCCGAA TACCTGTTCG AGGATGAGAA TGCCATGATC
AGGGTGGATA TGAGCGAGTA TATGGAGAAG TTCTCCGTTT CGCGTCTCGT GGGTGCCCCT
CCGGGATATG TGGGCTATGA AGAAGGCGGC CAACTGACGG AGCGCGTAAG ACGCAAACCC
TATTCCGTGG TTCTCTTGGA TGAGATCGAA AAGGCGCATG CCGATGTCTT CAATCTGCTC
TTACAGGTGA TGGACGAAGG TCAGCTGACC GACAGTCTGG GACGGCGCGT GAATTTCAAG
AACACCGTGA TCATCATCAC CTCCAACGTG GGTACACGCC AGCTCAAAGA CTTCGGGCAG
GGTATCGGGT TCCGTTCGGA AAAAGACGAG GAAGCGAACA AGGAGCATAG CCGTTCCGTG
ATCCAAAAAG CTCTGAACAA GACGTTCAGC CCCGAATTTC TCAACCGTTT GGACGATATC
ATCCTCTTCG ACCAACTGGG CAAGACGGAG ATTCGCCGGA TGGTGGACAT AGAGCTTAAA
GCCGTCTTGG CGCGCATCCA TCGTGCCGGA TACGACCTCG TCCTTACCGA TGAAGCCAAG
GATGTGATAG CGACGAAGGG ATACGACCTC CAATACGGAG CACGACCGCT CAAGCGCACA
CTCCAGAACG AAGTGGAGGA TCGCCTCACG GATCTTATCC TCTCCGGACA GATCGAGAAA
GGGCAGACGC TTACGCTCTC TGCTCGCGAT GGCGAGATCA TCGTACAAGA ACAAGCATAA
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| Protein sequence | MAYDFTQTFR NSLEYSYQEA TRLGVVAVTQ DMLVLGIIRD GDNGAIDIMR HYGINLYELK
RLIELEAIAE SLPASPEGSP IFTPSAREAI DDATDICADM EDEAVSPVHL LLSILNSTQE
SLVQKIFMKQ GIKYDTILSD YFGQRNPSEG KSPSEMEILD GYQDNDFDDE EDESSPPSGN
SGTGGGSGDA PEQNTGGGDT TTTTRSGGDT PALDTFGTDI TAMAAAGKLD PVVGREQEIE
RVIQILSRRK KNNPVLIGEP GVGKSAIVEG LAERIVNRKV SRILFDKRII SLDLAQMVAG
TKYRGQFEER LKAVLDELKK NPQIILFIDE IHTIVGAGSA AGSMDTANML KPALARGQVQ
CIGATTLDEY RKNIEKDGAL ERRFQKVPIA PSTAEETLTI LQNIKEKYED YHGVRYTDEA
IKAAVELTDR YVSDRFFPDK AIDAMDEAGA SVHITNVVAP KEIEILEAEL ASVRENKLSA
VKAQNYELAA SFRDQERRTQ QQIAEEKKKW EEQMSKHRET VDENVVAHVV ALMTGVPAER
LSTGEGERLR TMADDLKTKV VGQDTAIEKM VHAIQRNRLG LRNEKKPIGS FLFLGPTGVG
KTYLAKKLAE YLFEDENAMI RVDMSEYMEK FSVSRLVGAP PGYVGYEEGG QLTERVRRKP
YSVVLLDEIE KAHADVFNLL LQVMDEGQLT DSLGRRVNFK NTVIIITSNV GTRQLKDFGQ
GIGFRSEKDE EANKEHSRSV IQKALNKTFS PEFLNRLDDI ILFDQLGKTE IRRMVDIELK
AVLARIHRAG YDLVLTDEAK DVIATKGYDL QYGARPLKRT LQNEVEDRLT DLILSGQIEK
GQTLTLSARD GEIIVQEQA
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