Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0004 |
Symbol | |
ID | 2552205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 3108 |
End bp | 3812 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637148822 |
Product | NAD-dependent deacetylase |
Protein accession | NP_904363 |
Protein GI | 34539884 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0079912 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAAGA AAAGACTCGT CGTCTTGAGT GGCGCAGGCA TGAGTGCCGA AAGCGGCATA TCGACTTTTC GTGATGCCAA CGGATTGTGG GAGAATTATC CCGTCGAGGA TGTGGCCTCT ATCGATGGGT TTAGGCGCAA TCCTGCCCTC GTTCTCAAGT TCTACAATGC ACGCCGACGC GACTATGCCG GTTGCAAACC GAATGCAGGC CATATTGGTT TGGCGGAAAT GGAGAAGGAG TATGATGTAA GAATCATCAC GCAGAATGTG GATGATCTGC ACGAGAGAGC AGGCAGCACA CACGTCATTC ATCTGCACGG AGAGTTGATG AAGAACAGAT CTGTGGCCAC AGACAGTGTG CTCTATCCCG TAGACCCGAC CAATCCCGAT CTGCATGTAG GAGATCTGGC ACCCGACGGC TGTCAGCTAC GGCCGTTTAT TGTGTGGTTT GGAGAAGCTG TTCCGATGAT AGAGCCGGCC ATCGAAGAGG TAACACAGGC AGACATTCTC GTTGTCATCG GCACCTCTCT CAACGTTTAT CCGGCTGCCG GACTGTTGAA TTATGCTCCT CGCAACTGCC CCATCTATCT GATCGATCCA AAGCCTGTGC GCAGCACCTC CCGGCAAGAC ATTCGGTATA TCCATGCTCC TGCCACGGAA GGCGTAAGGA TGTTGCGGCA AGAACTCCGT GATATAGATC GCTAA
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Protein sequence | MNKKRLVVLS GAGMSAESGI STFRDANGLW ENYPVEDVAS IDGFRRNPAL VLKFYNARRR DYAGCKPNAG HIGLAEMEKE YDVRIITQNV DDLHERAGST HVIHLHGELM KNRSVATDSV LYPVDPTNPD LHVGDLAPDG CQLRPFIVWF GEAVPMIEPA IEEVTQADIL VVIGTSLNVY PAAGLLNYAP RNCPIYLIDP KPVRSTSRQD IRYIHAPATE GVRMLRQELR DIDR
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