| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5386 |
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| Symbol | |
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| ID | 1043341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6138786 |
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| End bp | 6140258 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148785 |
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| Product | CzcB family heavy metal RND efflux membrane fusion protein |
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| Protein accession | NP_747487 |
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| Protein GI | 26992062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.91149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA GGTCTATCGG TTTGATCACC GCAATCGCCC TGGCTATTGG CGTCGGGACA
GGCTACTGGT TGGGACATCC GGCCCAACCT GCACAAGCAC CCGCAATAGC AACAGAGCAG
AAGCCGTTGT ATTGGTACGA CCCCATGTAC CCGCAGCAGC ACTTCCCAGC GCCCGGCAAG
TCGCCATTCA TGGACATGCA ACTGGTAGCG AAATACGCCG AAGAAGGCAC AGACCCCGCA
GAGCCAGCGG TGCAAATCAG CCAAGGCGTT CAGCAGAACC TTGGGGTGCG CCTGGCGACG
GTGAGCCGTG GCCGGCTGCA GCGCACTCTG CAGGTCAGTG GCGTACTGGC CTTCGATGAG
CGGGATTTCA GTGTACTCCA GGCACGCACC GCAGGCTTCG TCGAGCGCAC CTATGGCCGA
GCCACGGGGG ATGTCGTGGC CAAAGGCGCG CCTCTGGCGG ATGTACTGGC TCCGGAATGG
GCTGGGCTGC AGGAAGAGTT TCTCGCGCTG CGCCACTTGG GTGATGTGCA GTTGCTAGCT
GCAGCACGCC AGCGCCTGCT GCTGGCCGGC ATGCCGGGTG AGTTGGTCGA CCGGGTCGCA
CGCAGCGGCA AGGTGCAGAA CCAGGTAACA CTGGTCGCAC CGAGCGCAGG GGTAATCCAG
GCGCTAGACC TGCGCCCAGG AATGACCGTG ACACCTGGCG CAACCCTGGC ACGTATCAAT
GGCATAGCGA ATGTGTGGCT CGAAGCCGCC GTGCCGGAAG CTCAGGCAAG TGGACTGCAT
GAGGGGCAAG CGGTAGAGGC CCACTTGCCG GCGTATCCCG GCGAGACCGT GCAAGGCAAA
CTGACTGCTC TACTCGCGGA TGCAGACCTG CAAAGCCGTA CCTTGCGCCT GCGTATTGAG
CTGCCCAACA AAGACGGTCG GCTAAGGCCG GGCATGACGG CACAGGTTTC GCTGCGCCCA
GGTGAGAACG CCGATGACAG CCTGTTGCTG CCCGCCGAGG CCGTAATCCG CACCGGCAAA
CGTGACCTGG TGATGGTCGC CGAAGACCAA GGCCGTTTCC GCCCAATAGA GGTGGTGCTA
GGCCAGGAGA ACGGCGGCCA GGTCGCAATC TTGAAAGGCC TGCAGGCCGG GCAGAAAGTC
GTGGCATCCG GGCAATTCCT GATCGACTCC GAAGCAAGCC TCAAGGGTAT TGAGGCCACC
ACAGCATCGG ATTCACCGCC TGCCTCGCAA GCACCTGAAC CCGAACTGCA CCAAGCGGAT
GGCCGTGTCG TACAAATCGA AGGCACCCAG CTGACCATCG ACCACGGGCC ATTCGTCACC
TTGGGAATGC CTGGGATGAC CATGACCTTT CCCGTCGCTG ATCCCGCCCT GGTTAACGGT
CTCAAGGTGG GTGACCGTAT CCGCTTTGGT ATCCGGGAGC GCGACGACGG CATGATCATC
GAACAGATCA ATGCGCTGGA GGACCAGCCA TGA
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| Protein sequence | MNSRSIGLIT AIALAIGVGT GYWLGHPAQP AQAPAIATEQ KPLYWYDPMY PQQHFPAPGK
SPFMDMQLVA KYAEEGTDPA EPAVQISQGV QQNLGVRLAT VSRGRLQRTL QVSGVLAFDE
RDFSVLQART AGFVERTYGR ATGDVVAKGA PLADVLAPEW AGLQEEFLAL RHLGDVQLLA
AARQRLLLAG MPGELVDRVA RSGKVQNQVT LVAPSAGVIQ ALDLRPGMTV TPGATLARIN
GIANVWLEAA VPEAQASGLH EGQAVEAHLP AYPGETVQGK LTALLADADL QSRTLRLRIE
LPNKDGRLRP GMTAQVSLRP GENADDSLLL PAEAVIRTGK RDLVMVAEDQ GRFRPIEVVL
GQENGGQVAI LKGLQAGQKV VASGQFLIDS EASLKGIEAT TASDSPPASQ APEPELHQAD
GRVVQIEGTQ LTIDHGPFVT LGMPGMTMTF PVADPALVNG LKVGDRIRFG IRERDDGMII
EQINALEDQP
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