| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5375 |
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| Symbol | |
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| ID | 1042743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6126966 |
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| End bp | 6127874 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637148774 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_747476 |
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| Protein GI | 26992051 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.323066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAATCC AGCCTCTTCC GCCGCTCAAC AGTCTTCATG CGTTTGAGTC TGCGGCACGC
CACTTGAGCT TTACCCTTGC CGCCAAGGAA TTGAATGTTA CCCAGGGTGC AATTAGCCGT
CAGGTTCGCC TTCTTGAGGA CTACCTGGGC AAGGCACTAT TCACCCGTAC CACCCGTAGC
ATGTCCCTGA CCCCCACCGG CGCGCAGTAT TACGAAACGG TGCGTGAATG CATGCTTCAC
CTGGCCCGCG CCACCGGCGA TATACGCCAG TGGCAAGGCA ACCAACAAGT CACCGTTGCC
ACCAGTACCG CCATGGCGTC GCTGTGGTTA CTGCCCAAGG TGTCGGAATT CCAGAGTGCC
CATGAAAACA TCGACCTGCG GATCATCGCC CACGATCATG TGAAGGATTA CGCCAGGCTC
GACAGCGACC TGGCGCTTTA CTACTGCAAC CCACCGCCCA AGGACATGGC TGTCACGCCG
CTGTTCTCGG AAGAAATCTT CCTGGTGTGC AGCCCGGCCT ATCTGGCCAG GCATCCGCAA
CTGAGCAGCA TCGAAGGGTT GTCGTCGTGT ACCTGGCTCT GGCTTGAAGA CTCCCAGCGC
GACTGGGTAG GTTGGCCCGA ATGGTTCAAG CGCCTGGGAT ACGAGCCCAT GACCCCCAAG
CATCGCGTCA ATATCAACAG CTACGGTATG CTGATCCAGT CGGCGATCAG TGGCCAGGGC
GTGGCCCTGG CCTGGGGCAA CCTGGTGGAC GATGCGTTGA GCACCGGTGC GCTGGTCAAG
CCCAACGATG TGGTACTCCA GACCGACGCC AAGTTCTGCC TGCTGGAGTC GTCCACCGAG
CGTGGTCCTC GTGAAAGCGT GCGGCTGTTC CGGGACTGGT TGATGGCCCT GCCTTCGGTG
CAGAAATAG
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| Protein sequence | MKIQPLPPLN SLHAFESAAR HLSFTLAAKE LNVTQGAISR QVRLLEDYLG KALFTRTTRS
MSLTPTGAQY YETVRECMLH LARATGDIRQ WQGNQQVTVA TSTAMASLWL LPKVSEFQSA
HENIDLRIIA HDHVKDYARL DSDLALYYCN PPPKDMAVTP LFSEEIFLVC SPAYLARHPQ
LSSIEGLSSC TWLWLEDSQR DWVGWPEWFK RLGYEPMTPK HRVNINSYGM LIQSAISGQG
VALAWGNLVD DALSTGALVK PNDVVLQTDA KFCLLESSTE RGPRESVRLF RDWLMALPSV
QK
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