Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5368 |
Symbol | |
ID | 1042083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6117860 |
End bp | 6119017 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637148767 |
Product | major facilitator family transporter |
Protein accession | NP_747469 |
Protein GI | 26992044 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTTCGCAT TATCCAAACG TTTCGGCACG ATTTATGTCG CTGCCTTGTT GATGCAGCTG GGTTCCAGCC TGCTGATGAC CTACCTGGCC CTGCGCCTGA ATGCTTCCGG TGTGGCGCAG GTATGGGGTG GTGCGCTTAT GGCCGCCAAC GCGCTGGGCA TGGTGGTGGG AGCCCGCTCC GGTTATTGGC TGATTGGCCT GGTCGGCCAT GCTCGGGCCT TTGTGGTGAG CGCCGGGGTA ATTGTCACTG CGGTGCTCTC GCACCAGCTC AGTGATGGTT TACTGCTGTG GCTTGCCCTG CGATTTGTCG TTGGTGCGGC AATGATGGGC CAATTGATGG TCATCGAGAG CTGGCTCAAT GACTGCGCAC CGGTCAGCCG GCGAGGCGGC GCCATGTCGC TGTACATGGT GGCCAGCTAT GTCGGCATGA TGCTAGGGCA ATTGATGCTC AGTCTGGGAG ATGGGCTGCA CACCTTGGCG TTGACGGGCG TGGCCATGGC TTTTGCCATT GGTTTGATCC CTGTGGCTCT GCACAACGGT ACCCAGCCGA GCAACATCAA CCAGGCCCGG ATCAAACCCA TGCTGTACCT GCGTAGACTT CCTCAATCGT TGTTCACGAT TCTTGCCTCG GGATTGCTGA ACGGTTGCCT GTATGGGCTG ACGCCGATCT TTGCTGCGCA ACTGGGCTTT AGTCCGGCGC AGGTCGGGCA GTTCATGGCT GTCAGCATTG CCGCCGGGCT TCTAGCACAA CTACCGCTGG GTAAACTGTC GGATCATATT TCCCGCATCA CCTTGATCCG CGCTACCGCT GCATTGCTGT GCATAGCCTA TTTGCCGCTG GCCTTCGGGC TGGCATCAGG GCAGCTGTGG ATCATGTTGG CCGGGGCTGC CATCGGCTTC TTGCAGTTCT GTTTGTATCC GCTGGGCGTT GCCCATGCCA ATGACAACCT AGAGCCGGAA CTGCGTGTAT CGCTGGCCGG AGTGCTGCTG ATGACCTTTG GTATCGGCGC GACCATCGGC CCGCTGGTTG CAGGGGCGAT GATGGAGCAT GCCGGTCCAC AAGCACTGTA TCTGTTCGGC ATTGGTGTAA CGGCTATGGT TGTTTGCTTT ATAAGGAATA AATCCGGCGT TGATGTGTCA TTGGCAAGGT TGTCATGA
|
Protein sequence | MFALSKRFGT IYVAALLMQL GSSLLMTYLA LRLNASGVAQ VWGGALMAAN ALGMVVGARS GYWLIGLVGH ARAFVVSAGV IVTAVLSHQL SDGLLLWLAL RFVVGAAMMG QLMVIESWLN DCAPVSRRGG AMSLYMVASY VGMMLGQLML SLGDGLHTLA LTGVAMAFAI GLIPVALHNG TQPSNINQAR IKPMLYLRRL PQSLFTILAS GLLNGCLYGL TPIFAAQLGF SPAQVGQFMA VSIAAGLLAQ LPLGKLSDHI SRITLIRATA ALLCIAYLPL AFGLASGQLW IMLAGAAIGF LQFCLYPLGV AHANDNLEPE LRVSLAGVLL MTFGIGATIG PLVAGAMMEH AGPQALYLFG IGVTAMVVCF IRNKSGVDVS LARLS
|
| |