| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5366 |
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| Symbol | lpd3 |
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| ID | 1042081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6115782 |
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| End bp | 6117182 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148765 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | NP_747467 |
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| Protein GI | 26992042 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.997164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCT ATGACGTGGT GATCATCGGC GGTGGCCCTG GCGGCTACAA CGCAGCCATC
CGTGCTGGCC AGTTGGGCCT GAGCGTTGCC TGCGTGGAAG GCCGCTCGAC CTTGGGCGGT
ACCTGCCTGA ACGTCGGCTG CATGCCATCC AAGGCGCTGC TGCATGCTTC GGAGCTTTAC
GAAGCTGCCA GCGGTGACGA GTTCGCCCAC CTCGGTATCG AAGTAAAGCC CACCCTCAAC
CTCGCCCAGA TGATGAAACA GAAGGACGAG AGCGTGACAG GCCTGACCAA GGGCATCGAA
TACCTGTTTC GCAAGAACAA GGTCGAGTGG ATCAAAGGCT GGGGCCGCCT GGATGGCATC
GGCAAGGTCG TGGTCAAGGC CGAAGACGGT AGCGAAACCG CGTTGCAGGC CAAGGACATC
GTCATTGCCA CCGGCTCTGA GCCCACCCCT CTGCCAGGTG TGACCGTCGA CAACCAGCGC
ATCATCGACT CGACCGGCGC GCTGTCGCTG CCGCAAGTGC CCAAGCACCT GGTTGTCATC
GGTGCTGGCG TGATCGGTCT TGAGCTGGGT TCGGTCTGGC GCCGCCTGGG TAGCCAGGTC
ACTGTCATCG AATACCTGGA CCGCATCTGC CCAGGCACTG ACACGGAAAC GGCCAAGACC
CTGCAGAAGG CGCTCGCCAA GCAAGGCATG GTGTTCAAGC TGGGCAGTAA AGTGACTCAG
GCTACCGCAG GTGCCGATGG CGTCAGCCTG ACGCTGGAGC CTGCCGCCGG GGGTACCGCA
GAATCGCTGC AAGCCGATTA CGTGTTGGTG GCTATCGGCC GTCGCCCTTA TACAAAAGGG
CTAAACCTGG AAAGCGTGGG CCTGGAAGCC GACAAGCGCG GCATGCTCAA CAACGAGCAC
CACCGTACCT CAGTGCCGGG TGTCTGGGTG ATTGGCGACG TCACTTCGGG CCCAATGCTG
GCGCACAAGG CCGAAGACGA AGCGGTGGCC TGTATCGAAC GCATCGCCGG CAAGCCCCAC
GAGGTCAACT ACAACCTCAT CCCTGGCGTG ATCTATACCC GCCCGGAGAT GGCCACCGTG
GGCAAGACTG AAGAGCAGCT CAAGGCCGAA GGACGTGCCT ACAAGGTTGG CAAGTTCCCC
TTCACCGCCA ACAGCCGTGC CAAGATCAAC CACGAGACCG AAGGCTTCGC CAAGGTCATC
GCCGATGCCG AAACCGATGA AGTACTGGGT GTGCACCTGG TGGGCCCAAG CGTCAGCGAG
ATGATTGGTG AGTTCTGCGT GGCTATGGAG TTCTCGGCCT CGGCAGAAGA TATCGCCCTC
ACCTGCCACC CGCACCCGAC GCGCTCCGAG GCCCTGCGCC AGGCGGCGAT GAATGTGGAT
GGCATGGCCA TGCAAATCTG A
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| Protein sequence | MKSYDVVIIG GGPGGYNAAI RAGQLGLSVA CVEGRSTLGG TCLNVGCMPS KALLHASELY
EAASGDEFAH LGIEVKPTLN LAQMMKQKDE SVTGLTKGIE YLFRKNKVEW IKGWGRLDGI
GKVVVKAEDG SETALQAKDI VIATGSEPTP LPGVTVDNQR IIDSTGALSL PQVPKHLVVI
GAGVIGLELG SVWRRLGSQV TVIEYLDRIC PGTDTETAKT LQKALAKQGM VFKLGSKVTQ
ATAGADGVSL TLEPAAGGTA ESLQADYVLV AIGRRPYTKG LNLESVGLEA DKRGMLNNEH
HRTSVPGVWV IGDVTSGPML AHKAEDEAVA CIERIAGKPH EVNYNLIPGV IYTRPEMATV
GKTEEQLKAE GRAYKVGKFP FTANSRAKIN HETEGFAKVI ADAETDEVLG VHLVGPSVSE
MIGEFCVAME FSASAEDIAL TCHPHPTRSE ALRQAAMNVD GMAMQI
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