Gene PP_5346 details

Gene Information

• Locus tag: PP_5346
• Symbol: oadA
• ID: 1042148
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: -
• Start bp: 6093452
• End bp: 6095260
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637148745
• Product: pyruvate carboxylase subunit B
• Protein accession: NP_747447
• Protein GI: 26992022
• COG category: [C] Energy production and conversion; [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein; [COG5016] Pyruvate/oxaloacetate carboxyltransferase
• TIGRFAM ID: [TIGR01108] oxaloacetate decarboxylase alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.00544178
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTCCAAGA AAATTCACGT AACCGACACG ATCCTGCGCG ACGCTCACCA GTCCCTGCTG 
GCTACCCGCA TGCGTACCGA AGACATGCTG CCGATCTGCG ACAAGCTCGA CAAGGTTGGC 
TACTGGTCGC TGGAAGTCTG GGGTGGTGCA ACCTTCGACG CCTGCGTGCG CTTCCTCAAG 
GAAGACCCGT GGGAGCGCCT GCGCAAGCTG CGCGCAGCGC TGCCAAACAC CCGCCTGCAA 
ATGCTGCTGC GCGGCCAGAA CCTGTTGGGC TACCGTCATT ACAGCGACGA CGTGGTCAAG 
GCCTTCGTCG CCAAGGCGGC GGTCAACGGC ATCGATGTGT TCCGCATTTT CGACGCCATG 
AACGACGTGC GTAACCTGCG CGTGGCCATC GAAGCGGTCA AGGCCGCCGG CAAGCACGCC 
CAGGGCACCA TCGCTTACAC CACCAGCCCG GTACACACCA TCGAAGCCTT CGTGAACCAG 
GCCAAGCAGA TGGAAGCCAT GGGTTGCGAC TCGGTGGCGA TCAAGGACAT GGCCGGCCTG 
CTGACCCCGT TCGCCACTGG CGAGCTGGTC AAGGCGCTGA AGGCAGAACA GTCGCTGCCG 
GTGTTCATTC ACTCCCACGA TACCGCCGGC CTGGCAGCCA TGTGCCAGCT GAAGGCCGTG 
GAAAATGGCG CGGACCACAT CGACACCGCC ATCTCCAGCT TCGCCTGGGG CACCAGCCAT 
CCGGGTACCG AGTCGATGGT TGCTGCACTC AAGGGCAGCG AGTTCGACAC CGGCCTGGAC 
CTGGAGCTTC TGCAGGAGAT CGGCTTGTAC TTCTACGCTG TGCGCAAGAA GTACCACCAG 
TTCGAAAGCG AGTTCACCGC GGTAGACACC CGGGTGCAGG TCAACCAGGT ACCGGGCGGC 
ATGATTTCCA ACCTGGCCAA CCAGCTCAAG GAGCAGGGCG CCCTCAACCG CATGAACGAA 
GTGCTGGCCG AAATCCCGCG TGTGCGTGAA GACCTCGGCT TCCCGCCACT GGTCACCCCG 
ACCTCGCAGA TCGTCGGCAC CCAGGCGTTC TTCAACGTGC TGGCGGGTGA GCGCTACAAA 
ACCATCACCA ATGAGGTGAA GCTGTACCTG CAAGGTGGCT ATGGCAAGGC CCCGGGTGTG 
GTCAACGAGC AACTGCGTCG CCAGGCTATC GGCAGCGAAG AAGTGATCGA TGTGCGCCCG 
GCTGACCTGC TGAAGCCGGA AATGGCCAAG TTGCGTAGCG ACATCGGTGC CCTGGCCCGT 
TGCGAAGAAG ACGTGCTGAC CTTTGCCATG TTCCCGGACA TTGGCCGCAA GTTCCTCGAA 
GAACGCGAAG CTGGCACCTT GACGCCTGAA GTTCTGCTGC CGATTCCGGA AGCCGGTGCC 
GTGGCTGCCC CAGGCGGTGA AGGCGTGCCG ACCGAGTTCG TGATCGACGT ACACGGCGAA 
ACCTACCGCG TCGACATCAC CGGTGTGGGC GTGAAGGCCG AAGGCAAGCG TCACTTCTAT 
CTGTCGATCG ACGGCATGCC GGAGGAAGTG GTATTCGAGC CACTCAACGA GTTCGTCAGC 
GGTGGCGGCA GCAAGCGCAA GCAAGCGACC GACCCTGGCC ACGTGAGCAC CACCATGCCA 
GGGAACATCG TTGATGTGCT GGTCAAGGAA GGTGACATGG TCAAGGCCGG CCAGGCGGTC 
CTGATCACCG AAGCCATGAA GATGGAAACC GAAGTGCAGG CGGCCATCGC CGGTAAGGTC 
GTGGCCATCC ATGTGGCCAA GGGTGATCGC GTGACGCCGG GTGAGATCCT GATTGAGATC 
GAGGGCTGA 

 

Protein sequence

MSKKIHVTDT ILRDAHQSLL ATRMRTEDML PICDKLDKVG YWSLEVWGGA TFDACVRFLK 
EDPWERLRKL RAALPNTRLQ MLLRGQNLLG YRHYSDDVVK AFVAKAAVNG IDVFRIFDAM 
NDVRNLRVAI EAVKAAGKHA QGTIAYTTSP VHTIEAFVNQ AKQMEAMGCD SVAIKDMAGL 
LTPFATGELV KALKAEQSLP VFIHSHDTAG LAAMCQLKAV ENGADHIDTA ISSFAWGTSH 
PGTESMVAAL KGSEFDTGLD LELLQEIGLY FYAVRKKYHQ FESEFTAVDT RVQVNQVPGG 
MISNLANQLK EQGALNRMNE VLAEIPRVRE DLGFPPLVTP TSQIVGTQAF FNVLAGERYK 
TITNEVKLYL QGGYGKAPGV VNEQLRRQAI GSEEVIDVRP ADLLKPEMAK LRSDIGALAR 
CEEDVLTFAM FPDIGRKFLE EREAGTLTPE VLLPIPEAGA VAAPGGEGVP TEFVIDVHGE 
TYRVDITGVG VKAEGKRHFY LSIDGMPEEV VFEPLNEFVS GGGSKRKQAT DPGHVSTTMP 
GNIVDVLVKE GDMVKAGQAV LITEAMKMET EVQAAIAGKV VAIHVAKGDR VTPGEILIEI 
EG