| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5342 |
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| Symbol | |
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| ID | 1042140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6089947 |
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| End bp | 6091476 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148741 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | NP_747443 |
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| Protein GI | 26992018 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000722465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCGCGAGT CGCCCCTCAT ACTGCCTTTC GACCCTGCCG GGATCGCCCT GGATCGCAGC
CGCGGGCTTA GCCAGCAGCT ATATCAGGCG TTGCGAGCGC GGGTGCTGGA TGGGCGCCTG
AGCAGTGGTA CTCGTCTGCC GGCTACGCGC GACCTGGCTG CCATGTTGGC GCTTTCACGC
AACAGCGTGG TGCGCGCGTA CGATCAACTG TATGCCGAGG GCTTCATCGA AAGCCGGGTC
GGTGATGGCA CCTACGTTAG CCGGCTGCCA AAACTGTCCA CACAAGTATC CACAGGGTTA
TCCCTGGGCT TATCAACAGG TTTATCCACA TTTCGTCAAG AAAATACTGA GGATTTATCC
AGCGGGAGGC ATATCAGCGC GCCTCTGCAG CGCCTGAAAA ACAACCATTT GCCACCCCCC
AGAAGCGGTT TGCCGCGTGC TTTTCGCGTT GGTATTCCAG CATTCGACCT GTTCCCGTTT
GACGTCTGGG CCAAGCTACA GGCGGGTTTC TGGCGCAACC CATCGCCTGC ACAACTGGGC
TATGGTGACC CCGCTGGCGA GCCGGCTTTG CGCGATCTGA TAGCGGCCTA TCTACGCCGC
TCGCGGGGGC TGAGCTGTAC GGCTGAACAA ATTGTGATCA CAAGCGGTGC GCAGCAGGCC
ATCAGCCTTT GTGCACAGTT GCTGCTGCAG CCGGGCGACG GTGTGGCTGT GGAAAACCCA
GGCTATCGGG CGGCCGCTCA TGCCTTCACG CTCGCGGGTG GCCGGGTGTG TGGCGTGCCT
GTGGATGAAG ACGGGCTGGA CTGCGGCCGG CTGGAACAGT TGACCGATTG CCGACTGACC
TATGTCACGC CTGCACACCA ATACCCGACC GGGGTGACCA TGAGCCTTGC ACGTCGCCTG
GCATTGCTGG CCTGGGCTGA ACGCAGTGAC GGCTGGATCA TCGAGGACGA CTACGACGGC
GAGTATCGCT ACAGCGGTGC GCCGCTGGCC CCGCTGGCAG CGCTCGACCG GCACGGGCGG
GTGCTGTATG TCGGCACCTT CGGCAAGATC GCCTTCCCGG CGTTGCGTCT AGGCTACCTG
GTGCTTCCGT CGAAACTGGT GCAGGCCTTC AGCCAGGGCA GAGCTATAGC GGTGCGGCAT
TCGGAGGTCA GCAGCCAGTG CGTGATGGCC GAGTTCATGG CCCGTGGCCA TTTTCAGCGG
CACATCCGCC GTATGCGCAA GGCGGCATTG AAGCGGCGCG ATGTGCTCAA GGCCGGTTGG
CCTGTGGATA TTCCGGGGTT GGGTGCAATG CCGGAAGTGG CGGCTGGGCT GCATGTGAAG
GTCAATGTGG ATAACTTTGC TCGGGAGCAG GAGTTGGTGG CCAAGGCTGA GGCGGTGGAA
GTGGAAGTGA CGCCACTGAG CAATTTCTGG TTGGCGGACT GCGAGGTGCC TGTGGATAAG
CGGGCGGGGC TGGTGCTGGG CTTCGCGGCG GTGCCGGAGG GCGAGATAGC CGAAGCCTTG
ATGAAATTAC GCAAAGTCTG GAGAAAATGA
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| Protein sequence | MRESPLILPF DPAGIALDRS RGLSQQLYQA LRARVLDGRL SSGTRLPATR DLAAMLALSR
NSVVRAYDQL YAEGFIESRV GDGTYVSRLP KLSTQVSTGL SLGLSTGLST FRQENTEDLS
SGRHISAPLQ RLKNNHLPPP RSGLPRAFRV GIPAFDLFPF DVWAKLQAGF WRNPSPAQLG
YGDPAGEPAL RDLIAAYLRR SRGLSCTAEQ IVITSGAQQA ISLCAQLLLQ PGDGVAVENP
GYRAAAHAFT LAGGRVCGVP VDEDGLDCGR LEQLTDCRLT YVTPAHQYPT GVTMSLARRL
ALLAWAERSD GWIIEDDYDG EYRYSGAPLA PLAALDRHGR VLYVGTFGKI AFPALRLGYL
VLPSKLVQAF SQGRAIAVRH SEVSSQCVMA EFMARGHFQR HIRRMRKAAL KRRDVLKAGW
PVDIPGLGAM PEVAAGLHVK VNVDNFAREQ ELVAKAEAVE VEVTPLSNFW LADCEVPVDK
RAGLVLGFAA VPEGEIAEAL MKLRKVWRK
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