| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5330 |
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| Symbol | |
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| ID | 1042150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6077927 |
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| End bp | 6079216 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148729 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_747431 |
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| Protein GI | 26992006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0357971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00453891 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTCCG TGCCCAGCAG TATCGAGCAG CCCTCGCGGC CGCTGACCCG CAGCGACTAC
AAGACCCTCT CACTGTCCGC CCTGGGTGGT GCGCTGGAGT TCTACGATTT CATCATCTTC
GTGTTCTTCG CCACGGTGGT GGGCAAGTTG TTCTTCCCGG CCGACATGCC CGAGTGGCTG
CGGCTGATGC AAACGTTCGG CATCTTCGCC GCCGGCTACC TGGCGCGGCC GCTGGGCGGC
ATCATCATGG CCCACTTCGG CGACTTGCTC GGGCGCAAGA AGATGTTCAC CCTGAGCATC
TTCATGATGG CCCTGCCGAC CCTGATCATG GGCCTGCTGC CGACGTATGC GCAGATCGGC
ATGTGGGCAC CGATCCTGCT GTTGCTGATG CGCGTGATCC AAGGCGCGGC AATCGGCGGC
GAAGTACCGG GCGCATGGGT GTTCGTCTCT GAACACGTGC CGGCTCGCAA CACCGGCTAT
GCCTGCGGCA CCCTGACCGC CGGCCTGACC GCCGGCATTC TGCTGGGCTC GCTGGTAGCG
ACCTTGATCA ACAGCGTGTA CAGCGCGGAA GAAGTGGCTG ACTACGCCTG GCGAATCCCG
TTCCTGCTTG GCGGTGTGTT CGGCCTGTTC TCGGTGTACC TGCGCCGCTG GCTGCACGAA
ACCCCGGTGT TCGCCGAAAT GCAGCAACGC AAGGCACTGG CCGAGGAGTT GCCACTGCGC
GCCGTGCTGC GTGACCACCG TGGTCCGATC ATCCTGTCGA TGCTGCTGAC CTGGATGCTT
TCGGCCGGCA TTGTAGTGGT CATCCTGATG ACCCCGGCGC TGTTGCAGAG CATCTACCAC
ATCAGCCCGA CCGACTCGCT CAAGGCCAAC AGCCTGGCCA TCGTGTTGCT CAGCTTCGGC
TGTATTGGTG CCGGCAGCCT GGCCGACCGC TATGGTGCGG GCCGGGTGTT CGTGATCGGC
AGCCTGCTTT TGCTGGTCAG CTCCTGGGTC TTCTACCACA GCCTGCCGAC CCGTCCCGAG
TTGCTGTTCC CGCTGTATGC CGTGACCGGC CTGTGCGTGG GCGTGATTGG CGCAGTGCCT
TATGTCATGG TCAAGGCGTT CCCGGCGGTG GTGCGTTTCA GCGGGTTGTC GTTCTCGTAC
AACGTGGCCT ACGCGATCTT TGGCGGGCTG ACGCCGATGG TGGTGACCGC ACTGCTGAAG
GTGAGCCCGA TGGCGCCTGC CTACTACGTG GCAGGCCTGT GCGCCGTCGG TCTAGCCGTG
GGCCTGTACC TGCTCGCCAA CAAGCGCTGA
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| Protein sequence | MTSVPSSIEQ PSRPLTRSDY KTLSLSALGG ALEFYDFIIF VFFATVVGKL FFPADMPEWL
RLMQTFGIFA AGYLARPLGG IIMAHFGDLL GRKKMFTLSI FMMALPTLIM GLLPTYAQIG
MWAPILLLLM RVIQGAAIGG EVPGAWVFVS EHVPARNTGY ACGTLTAGLT AGILLGSLVA
TLINSVYSAE EVADYAWRIP FLLGGVFGLF SVYLRRWLHE TPVFAEMQQR KALAEELPLR
AVLRDHRGPI ILSMLLTWML SAGIVVVILM TPALLQSIYH ISPTDSLKAN SLAIVLLSFG
CIGAGSLADR YGAGRVFVIG SLLLLVSSWV FYHSLPTRPE LLFPLYAVTG LCVGVIGAVP
YVMVKAFPAV VRFSGLSFSY NVAYAIFGGL TPMVVTALLK VSPMAPAYYV AGLCAVGLAV
GLYLLANKR
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