Gene PP_5295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5295 
Symbol 
ID1042222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6042142 
End bp6043005 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID637148694 
Producthypothetical protein 
Protein accessionNP_747396 
Protein GI161378114 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.10654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.478685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCACA GCATGACCGC TTTTGCTCGT GTCGAGCGCG CCGGCAGCCA AGGCACCCTG 
GTCTGGGAGC TGCGTTCGGT CAACCACCGT TATCTGGAGC CGCACCTGCG CCTGCCCGAA
GCCCTGCGCG ACCTCGAAGG CGGTGTACGT GAAGGCCTGC GCCAGGGCCT GTCACGCGGC
AAGGTGGAAT GCACCTTGCG CCTCAACGAA GACAGCAATG GCAAACCGCT GAAAGTGGAC
CATGAGCGCG CCGCGCAACT GGTTGCCGCC GCCGAGGAAG TGGCTGGCCT GATCAAGCAG
CCGGCCCCCC TGAACCCGCT GGAAGTGCTG TCATGGCCAG GCGTGCTGGT GGCCGACACC
AGCGACCCCC AGGCACTGAA CGCCGAAGCC ATGGCGCTGT TCGACGAAGC GCTGGCCGAA
CTCAAGGCCG GGCGCCAGCG CGAAGGCCAG GAACTGGCCC GGCTGATCAA CGAACGCCTG
GACAACATGG CCAGCGAAGT CACTACCCTG CGCGCCCTGG TGCCGCAGAT GCTGGCGGCG
CAGCGGCAGA AGATTCTCGA CCGCTTCGGC GACATGCAAG CCGAGCTGGA CCCACAGCGC
CTGGAGCAGG AGATGGTACT GCTGGCCCAG AAAAGCGACG TGGCAGAGGA ACTCGACCGC
CTCAGCACCC ACGTCACCGA AGTGCGCCGC GTGCTCAAGG GTGGCGGCGC CGCTGGCCGG
CGCCTGGACT TCCTGATGCA GGAACTCAAC CGCGAGGCCA ACACCCTCGG CTCCAAGGCC
TTCGACCCAC GCAGCACGCA AGCGGCGGTC AACCTGAAGG TATTGATCGA ACAGATGCGT
GAACAAGTAC AGAACATCGA GTAA
 
Protein sequence
MVHSMTAFAR VERAGSQGTL VWELRSVNHR YLEPHLRLPE ALRDLEGGVR EGLRQGLSRG 
KVECTLRLNE DSNGKPLKVD HERAAQLVAA AEEVAGLIKQ PAPLNPLEVL SWPGVLVADT
SDPQALNAEA MALFDEALAE LKAGRQREGQ ELARLINERL DNMASEVTTL RALVPQMLAA
QRQKILDRFG DMQAELDPQR LEQEMVLLAQ KSDVAEELDR LSTHVTEVRR VLKGGGAAGR
RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE