Gene PP_5291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5291 
SymbolpyrE 
ID1045331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6039265 
End bp6039906 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID637148690 
Productorotate phosphoribosyltransferase 
Protein accessionNP_747392 
Protein GI26991967 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.488718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGT ATCAGCGCGA CTTTATCCGT TTTGCCATCG ATCGCGGGGT ACTGCGTTTC 
GGTGAATTCA CCCTGAAATC GGGGCGTACC AGCCCGTATT TCTTCAATGC CGGCTTGTTC
AACACCGGCT CCGCACTGGC TGAGCTGGGG CGTTGCTACG CCGCCGCCAT CGTCGATAGC
AAGATCCCGT TCGATGTGCT GTTCGGCCCG GCCTACAAGG GTATCCCTTT GGCGGCGACT
ACCGCCGTGG CCCTTGCCGA CCAGCATCAG CTGGACGTGC CATGGTGCTT CAACCGCAAG
GAAGCCAAGG ACCATGGCGA AGGTGGCAGC CTGGTCGGCG CGCCGCTGGC CGGTGACGTG
CTGATCATCG ACGACGTGAT TACTGCCGGT ACCGCCATTC GTGAGGTCAT GCAGATCATC
AACGCCCAGC AGGCCAAGGC CGCTGGTGTA CTGATCGCGC TGAACCGTGA AGAGCGCGGC
AATGGCGAAC TGTCGGCGAT CCAGGAAGTG GAACGCGACT TCGGTATCCC GGTGGTCAGC
ATTGTTTCGC TGACCCAGGT GCTGGAGTTC CTGGCTGACG ATCCACAGCT GAAACAGCAT
CTGCCGGCTG TCGAGGCCTA CCGGGCGCAG TACGGGATCT GA
 
Protein sequence
MQPYQRDFIR FAIDRGVLRF GEFTLKSGRT SPYFFNAGLF NTGSALAELG RCYAAAIVDS 
KIPFDVLFGP AYKGIPLAAT TAVALADQHQ LDVPWCFNRK EAKDHGEGGS LVGAPLAGDV
LIIDDVITAG TAIREVMQII NAQQAKAAGV LIALNREERG NGELSAIQEV ERDFGIPVVS
IVSLTQVLEF LADDPQLKQH LPAVEAYRAQ YGI