Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5291 |
Symbol | pyrE |
ID | 1045331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6039265 |
End bp | 6039906 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148690 |
Product | orotate phosphoribosyltransferase |
Protein accession | NP_747392 |
Protein GI | 26991967 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.488718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCGT ATCAGCGCGA CTTTATCCGT TTTGCCATCG ATCGCGGGGT ACTGCGTTTC GGTGAATTCA CCCTGAAATC GGGGCGTACC AGCCCGTATT TCTTCAATGC CGGCTTGTTC AACACCGGCT CCGCACTGGC TGAGCTGGGG CGTTGCTACG CCGCCGCCAT CGTCGATAGC AAGATCCCGT TCGATGTGCT GTTCGGCCCG GCCTACAAGG GTATCCCTTT GGCGGCGACT ACCGCCGTGG CCCTTGCCGA CCAGCATCAG CTGGACGTGC CATGGTGCTT CAACCGCAAG GAAGCCAAGG ACCATGGCGA AGGTGGCAGC CTGGTCGGCG CGCCGCTGGC CGGTGACGTG CTGATCATCG ACGACGTGAT TACTGCCGGT ACCGCCATTC GTGAGGTCAT GCAGATCATC AACGCCCAGC AGGCCAAGGC CGCTGGTGTA CTGATCGCGC TGAACCGTGA AGAGCGCGGC AATGGCGAAC TGTCGGCGAT CCAGGAAGTG GAACGCGACT TCGGTATCCC GGTGGTCAGC ATTGTTTCGC TGACCCAGGT GCTGGAGTTC CTGGCTGACG ATCCACAGCT GAAACAGCAT CTGCCGGCTG TCGAGGCCTA CCGGGCGCAG TACGGGATCT GA
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Protein sequence | MQPYQRDFIR FAIDRGVLRF GEFTLKSGRT SPYFFNAGLF NTGSALAELG RCYAAAIVDS KIPFDVLFGP AYKGIPLAAT TAVALADQHQ LDVPWCFNRK EAKDHGEGGS LVGAPLAGDV LIIDDVITAG TAIREVMQII NAQQAKAAGV LIALNREERG NGELSAIQEV ERDFGIPVVS IVSLTQVLEF LADDPQLKQH LPAVEAYRAQ YGI
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