Gene PP_5288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5288 
Symbol 
ID1042276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6035462 
End bp6036853 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID637148687 
Productphosphomannomutase 
Protein accessionNP_747389 
Protein GI26991964 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACC TGGTCCCCGC CGCATTGCCC GACAGCATTT TCCGCGCATA TGACATCCGC 
GGCGTGGTCG GCAAGACCCT TCACGCCGAA ACCGCCTACT GGATCGGCCG CGCCATCGGC
GCGCAAAGCC TGGCCCAGGG CGAACCGCAG GTTTCGGTAG GGCGCGATGG CCGCCTGTCG
GGCCCGATGC TGGTGGAACA GCTGATCAAA GGCCTGGTCG ATGCGGGCTG CAACGTCAGC
GACGTCGGCC TGGTGCCTAC CCCGGCGCTG TACTACGCAG CCAACGTGCT GGCCGGCAAG
TCCGGTGTGA TGCTGACCGG CAGCCACAAC CCGTCGGACT ACAACGGTTT CAAGATCGTC
ATCGCCGGTG ACACCCTGGC CAACGAACAG ATCCAGGCCC TGCTGACCCG CCTGAAAACC
AACGACCTGA CCCTGGCCCA AGGCCGCGTG GAAAAGGTCG AGATCCTCGA CCGCTACTTC
AAGCAGATCG TCGGCGACGT GAAGCTGGCG AAAAAGCTCA AAGTGGTGGT GGACTGCGGC
AACGGCGCCG CTGGCGTGGT TGCACCGCAA CTGATCGAAG CCCTGGGCTG CGAAGTGATC
CCGCTGTTCT GCGAGGTCGA CGGCAACTTC CCCAACCACC ACCCGGACCC GGGCAAGCCG
GAAAACCTCG AGGACCTGAT CGCCAAGGTC AAGGAAACCG GTGCCGATAT CGGTCTGGCC
TTCGACGGTG ACGGCGACCG CGTCGGCGTG GTGACCAACA CCGGCAGCAT CGTCTACCCC
GACCGCCTGC TGATGCTGTT TGCCCAGGAC GTGCTGTCGC GCAACCCGGG CGCCGAGATC
ATCTTCGACG TCAAATGCAC CCGCCGCCTG ACCCCGTTGA TCGAACAGCA CGGTGGCCGC
GCCTTGATGT GGAAAACCGG CCATTCGCTG ATCAAGAAGA AGATGAAGCA GACCGGTTCG
CTGCTGGCAG GCGAGATGAG CGGTCACATC TTCATCAAGG AACGCTGGTA CGGTTTTGAC
GACGGCATCT ATAGCGCCGC GCGCCTGCTG GAGATCCTCA GCAAGACCGA GCAGAGCGCC
GAAAACCTGT TTGCCGCCTT CCCGAACGAC ATTTCCACGC CGGAAATCAA TATTGATGTG
ACCGACGAGG GTAAATTCAG CATCATTGAT GCACTGCAAC GCGACGCCGA CTGGGGCGAA
GCCAACCTGA CCACCATCGA CGGTGTGCGG GTCGACTACG CCAACGGCTG GGGCCTGGTT
CGCGCCTCCA ACACCACCCC GGTGCTGGTA CTGCGTTTCG AGGCCGACAG CGACGCCGAA
TTGCAACGTA TCAAGGATGT TTTCCGCACC CAGTTGCTGC GGGTAGAGCC TGAGCTGCAA
CTGCCGTTCT GA
 
Protein sequence
MAHLVPAALP DSIFRAYDIR GVVGKTLHAE TAYWIGRAIG AQSLAQGEPQ VSVGRDGRLS 
GPMLVEQLIK GLVDAGCNVS DVGLVPTPAL YYAANVLAGK SGVMLTGSHN PSDYNGFKIV
IAGDTLANEQ IQALLTRLKT NDLTLAQGRV EKVEILDRYF KQIVGDVKLA KKLKVVVDCG
NGAAGVVAPQ LIEALGCEVI PLFCEVDGNF PNHHPDPGKP ENLEDLIAKV KETGADIGLA
FDGDGDRVGV VTNTGSIVYP DRLLMLFAQD VLSRNPGAEI IFDVKCTRRL TPLIEQHGGR
ALMWKTGHSL IKKKMKQTGS LLAGEMSGHI FIKERWYGFD DGIYSAARLL EILSKTEQSA
ENLFAAFPND ISTPEINIDV TDEGKFSIID ALQRDADWGE ANLTTIDGVR VDYANGWGLV
RASNTTPVLV LRFEADSDAE LQRIKDVFRT QLLRVEPELQ LPF