Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5284 |
Symbol | radC |
ID | 1045679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6032863 |
End bp | 6033543 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148683 |
Product | DNA repair protein RadC |
Protein accession | NP_747385 |
Protein GI | 26991960 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA GGGAGTGGCC GGCGGAAGAA CGGCCTAGGG AGAAGTTGTT GCAGCGAGGG GCAGGGAGCC TGACAGATAC GGAGCTGCTG GCCGTTTTTC TCGGCTCAGG CGTACGTGGG TGTAATGTCG TGGAGCTTTC TCGAGGCTTG TTGGTGAAGT TCGGCAGCTT GCGCCGGTTG CTGGAGGCCG ACCGCGAGGC CTTCGTCGGC GAGCTTGGGT TGGGCCCGGT GAGGTACAGC CAGCTGCAGG CACTGCTTGA GATAGGCCGC AGGCACCTTG CAACGTCGAT TGAGCGGGAG TCTGCCATGG ACAGCCCGGC AGCGGTGCGA CGCTACTTGA AAGCCATGCT CAGGCATGAG GCCAGCGAGG TGTTCGGGTG TCTGTTTCTC GATACCAAGC ACCGGCCACT GGCATTCGAG ATCCTGTTCA GGGGCACGAT AGATCGGGCG AGTGTCTATC CGCGAGAGGT GGTGCGGCGG GCGCTGGTGC ACAACGCTGC GGCATTGATC CTGTGCCACA ACCATCCTTC AGGGATCAGT GAACCGAGTC AGGACGATGT GCATTTGACG CTGTCGTTGA AGCGGGGGCT GGCGTTGATT GATGTGCGGG TGCTGGATCA CATCATCATT GGTGATGGGG AGCCGTTGTC GATGGTCGAG CATGGGTGGA TTGTGGTCTG A
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Protein sequence | MNIREWPAEE RPREKLLQRG AGSLTDTELL AVFLGSGVRG CNVVELSRGL LVKFGSLRRL LEADREAFVG ELGLGPVRYS QLQALLEIGR RHLATSIERE SAMDSPAAVR RYLKAMLRHE ASEVFGCLFL DTKHRPLAFE ILFRGTIDRA SVYPREVVRR ALVHNAAALI LCHNHPSGIS EPSQDDVHLT LSLKRGLALI DVRVLDHIII GDGEPLSMVE HGWIVV
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