Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5271 |
Symbol | lrp |
ID | 1042271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6020796 |
End bp | 6021284 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637148670 |
Product | leucine-responsive regulatory protein |
Protein accession | NP_747372 |
Protein GI | 26991947 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC AGCACCAGAC CAAGCGTGAA CTGGACAAGA TCGACCGCAA CATCCTGCGT ATCCTGCAGA ATGACGGGCG TATTTCCTTC ACCGAACTGG GCGAGAAAGT TGGGCTGTCC ACCACTCCTT GTACCGAGCG GGTTCGCCGC CTTGAGCGCG AGGGCATCAT CATGGGCTAC AACGCCCGCC TGAACCCGCA GCACCTCAAG GGCAGCCTGC TGGTGTTCGT GGAAATCAGC CTGGACTACA AGTCGGGCGA TACCTTCGAG GAGTTCCGCC GCGCGGTCTT GAAGCTGCCC CACGTGCTGG AATGCCACCT GGTGTCGGGT GACTTCGACT ATCTGGTTAA AGCGCGTATT TCGGAAATGG CCTCATACCG CAAGCTGCTC GGCGACATCC TGCTGAAACT GCCGCACGTG CGCGAATCGA AGAGCTACAT CGTGATGGAA GAGGTGAAGG AGAGCCTTTG CCTGCCGATC CCGGACTGA
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Protein sequence | MRTQHQTKRE LDKIDRNILR ILQNDGRISF TELGEKVGLS TTPCTERVRR LEREGIIMGY NARLNPQHLK GSLLVFVEIS LDYKSGDTFE EFRRAVLKLP HVLECHLVSG DFDYLVKARI SEMASYRKLL GDILLKLPHV RESKSYIVME EVKESLCLPI PD
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