| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5245 |
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| Symbol | |
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| ID | 1042324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5985725 |
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| End bp | 5986711 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148644 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | NP_747346 |
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| Protein GI | 26991921 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.608948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGAAA AACCCGCCCA CCGCACCGTG GCCATGGTGC TGTTCAACGA TGTGTTACTG
CTGGATGTCA CCGGTCCCAT GGATGCATTC GCCATCGCCA ACCGGTTCTT GCCTGCAGCA
CGGCAATATC GGCTGCTGAC CTTGGCCGAG GGGCAAGCAG TGGTACGCGG CTCATGCGGC
CTGAAGGTAG TGGCCGACCG GCGCCTGGAA GACTTGCCGG AGGCCGTCGA CCTGTTGCTG
GTGCCGGGCG GCCCTGGGGC CTATGACATC GCCCTGCCAG GGATCGAGCG CTGGCTGCCC
AAGGCCGTGC GCCAGGCAAA GCGCTTCGGT GCCATCTGCA CCGGGGTGTT CCTGCTGGGG
CGGGCCGGGT TACTGAATGG CTATCGCTGC ACCACCCACT GGAACTACGT GGAGCGCCTG
GCACAGGCGT TTCCCGAAGC CAAGGTGGAG ACCGAGCAGA TTTACGTGAT GGACCGCTGC
CTGATCACCT CGGGCGGTAT CACTGCAGGG ATCGACCTGG CACTGGCGGT GGTCGCCGAG
GACCATGGCA AGGCGCTGGC CCTGGAAGTA GCCAAGGTAC TGCTGGTAGC CCGCCACCGT
CAGGGTGGGC AGACACCCTA CGGGCCATTG CTGGCTGCGG TACCACGCGA TGACTCGCCG
ATTGCCCGGG TGCAGGCCTA TATCGTCGAC CACATCGAGC AGGCGTTCAC CGTGCAGAAA
ATGGCCGAAC TGGTGGCCAT GAGCGGGCGT AACTTTGCCC GGACGTTTCT GCGCGAGGTG
GGCATTACGC CGCTGCAGTA CCTGCAGAAT GCGCGCATCG ATCGTACGCG CAAGTTGCTC
GAATGCGGTG ACCTGCCGAT GAAGGTGGTG GCGGCGCAGT GCGGGTTTGG CAGTGACCGA
CACATGCGCA AGGTATTCTT TGAGCGAATT GGCATGACGC CGGCGCAGTA TCGGGCACAG
TTTGGTGGCG GTGAACAGTC CGATTAG
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| Protein sequence | MQEKPAHRTV AMVLFNDVLL LDVTGPMDAF AIANRFLPAA RQYRLLTLAE GQAVVRGSCG
LKVVADRRLE DLPEAVDLLL VPGGPGAYDI ALPGIERWLP KAVRQAKRFG AICTGVFLLG
RAGLLNGYRC TTHWNYVERL AQAFPEAKVE TEQIYVMDRC LITSGGITAG IDLALAVVAE
DHGKALALEV AKVLLVARHR QGGQTPYGPL LAAVPRDDSP IARVQAYIVD HIEQAFTVQK
MAELVAMSGR NFARTFLREV GITPLQYLQN ARIDRTRKLL ECGDLPMKVV AAQCGFGSDR
HMRKVFFERI GMTPAQYRAQ FGGGEQSD
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