Gene PP_5234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5234 
Symbol 
ID1042380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5967730 
End bp5968068 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content56% 
IMG OID637148633 
Productnitrogen regulatory protein P-II 
Protein accessionNP_747335 
Protein GI26991910 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG TCACAGCCAT CATCAAGCCG TTCAAGCTGG ACGACGTGCG CGAGTCGCTG 
TCGGAAATCG GCGTGCAGGG CATCACCGTC ACCGAAGTCA AAGGTTTCGG TCGGCAGAAG
GGCCACACCG AGCTGTATCG CGGTGCTGAA TATGTGGTCG ATTTCCTGCC CAAGGTGAAG
ATCGATGTCG CCATCGATGA CAAAGACCTT GATCGGGTAA TCGAAGCCAT CACCAAGGCA
GCCAACACCG GCAAGATCGG TGACGGCAAG ATTTTCGTGG TGAATCTGGA GCAGGCGATC
CGCATCCGTA CCGGCGAAAC CGATACCGAC GCGATCTAA
 
Protein sequence
MKLVTAIIKP FKLDDVRESL SEIGVQGITV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK 
IDVAIDDKDL DRVIEAITKA ANTGKIGDGK IFVVNLEQAI RIRTGETDTD AI