Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5233 |
Symbol | amtB |
ID | 1042352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5966352 |
End bp | 5967683 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148632 |
Product | ammonium transporter |
Protein accession | NP_747334 |
Protein GI | 26991909 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.265886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC GTAAGATCGC AGGGCTAGGA GCCCTATTGT CCCTCGTAAT GCCCGGGCTT GCCCTGGCAG AGGAAGCTGC CCCAGCGCTT AATTCCGGCG ACACCGCCTG GATGCTGACC GCAACGGCGC TGGTGCTGTT CATGACTATT CCGGGCTTGG CCCTGTTCTA TGGCGGCATG GTGCGATCCA AGAACGTGCT GTCGGTGATG ATGCAGTGCT TTGCAATCAC CGGCCTGATG AGCATTCTCT GGGTCGTCTA CGGCTACAGC ATGGCCTTCG ATACCGCCGG TATGGAAAAG GGCGTGCTCA ACTTCAACTC CTTCGTTGGC GGCTTCTCCA AGGCCTTCCT CAGCGGTGTC ACGCCCGACA GCCTGACCTC GGCCACCGCG CTGTTCCCTG AAGCGGTGTT CATCACCTTC CAGATGACGT TCGCCATCAT CACCCCGGCG TTGATCGTCG GTGCCTTTGC CGAGCGCATG AAGTTCTCGG CGATGCTCGT ATTCATGGGT ATCTGGTTCA CCCTGGTGTA TGCGCCGATC GCACACATGG TGTGGAGCGG TGACGGTGCC CTGATGTGGG ACTGGGGCGT ACTGGACTTC GCTGGCGGCA CCGTGGTGCA CATCAACGCC GGTATCGCAG GCCTGGTCTG CTGCCTGGTA CTGGGCAAGC GCAAGGGCTA CCCGACCACG CCGATGGCCC CGCACAACCT CGGCTATACC CTGATGGGCG CAGCGATGCT GTGGATCGGC TGGTTCGGTT TCAACGCAGG CTCTGCTGCT GCCGCCAACG GTACTGCCGG CATGGCCATG CTGGTCACTC AGATCGCTAC CGCCGCCGCC GCCCTGGGCT GGATGTTCGC CGAGTGGGTC GGTCACGGTA AGCCAAGTGC TCTGGGCATC GCTTCGGGCG TGGTTGCTGG CCTGGTCGCC ATCACCCCGG CTGCGGGCAC CGTCGGGCCG ATTGGCGCGC TGATCATCGG CCTGGTTTCG GGTGTGCTCT GCTACTTCTG CGCCACCACG CTCAAGCGCA AACTCGGCTA TGACGATTCG CTGGATGCCT TCGGCGTGCA CGGTGTTGGC GGCATCATCG GTGCCATCCT CACGGGTGTA TTCGCGGCTC CGGCGCTGGG CGGCTTCGGT ACCGTCACCG ACATCGGCAT GCAAGTCTGG ATCCAGGCCA AAGGTGTGAT TTTCACCGTG GTCTACACCG CCATCGTCAC CTACGTGATT CTCAAGGTGC TGGATGTGGT GATGGGCCTG CGGGTCAACG AAGAAGAAGA GTCGGTCGGC CTCGACCTGG CTCAGCACAA CGAGCGCGGC TACAACCTGT AA
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Protein sequence | MTLRKIAGLG ALLSLVMPGL ALAEEAAPAL NSGDTAWMLT ATALVLFMTI PGLALFYGGM VRSKNVLSVM MQCFAITGLM SILWVVYGYS MAFDTAGMEK GVLNFNSFVG GFSKAFLSGV TPDSLTSATA LFPEAVFITF QMTFAIITPA LIVGAFAERM KFSAMLVFMG IWFTLVYAPI AHMVWSGDGA LMWDWGVLDF AGGTVVHINA GIAGLVCCLV LGKRKGYPTT PMAPHNLGYT LMGAAMLWIG WFGFNAGSAA AANGTAGMAM LVTQIATAAA ALGWMFAEWV GHGKPSALGI ASGVVAGLVA ITPAAGTVGP IGALIIGLVS GVLCYFCATT LKRKLGYDDS LDAFGVHGVG GIIGAILTGV FAAPALGGFG TVTDIGMQVW IQAKGVIFTV VYTAIVTYVI LKVLDVVMGL RVNEEEESVG LDLAQHNERG YNL
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