Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5220 |
Symbol | elbB |
ID | 1041958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5955100 |
End bp | 5955765 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148619 |
Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
Protein accession | NP_747321 |
Protein GI | 26991896 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGA CAAAAAAAGT AGCGGTGATT CTTTCCGGCT GTGGCGTGTA TGACGGCGCC GAAATCCACG AAAGCGTGAT CACGCTGCTG CGCCTCGACC AGCGCGGTGC GCAGGTGCAG TGCTTCGCGC CGAACATCGC ACAGATGCAT GTAATCAACC ATCTGACCGG CAAAGAAATG CCCGAATCGC GCAATGTACT GGTGGAGTCG GCGCGCATCG CCCGCGGCGA GGTCAAGGAT ATCCGTGAGG CCAAGGCCGA AGACTTCGAT GCGCTGATCG TGCCGGGCGG TTTCGGGGCA GCAAAAAACC TCTCCAACTT TGCCGTGGAA GGCGCCAACT GCAGCGTGAA CCCAGACGTG CTGGCATTGG CCGAAGCCTT TGCCGACGCC TGCAAACCCG TAGGCCTGAT CTGCATCTCG CCGGCGCTGG CGGCGAAGAT TTACGGGCCG GGGGTGGTCT GCACCATCGG GCGCGATGCC GGCACTGCGG CGGCTGTCGA AAAGATGGGC GGCACCCATG AAGAATGCGA TGTACACGAC ATTGTCGAAG ACACCCAGCG CAAGCTCGTG ACTACCCCGG CGTACATGGA GGCCAAGTCG ATCAGCGAGG CGGCGGGCGG GATCTACAAG CTGGTGGACC GAGTGCTGGA GCTGACGCAC GAGTAA
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Protein sequence | MSMTKKVAVI LSGCGVYDGA EIHESVITLL RLDQRGAQVQ CFAPNIAQMH VINHLTGKEM PESRNVLVES ARIARGEVKD IREAKAEDFD ALIVPGGFGA AKNLSNFAVE GANCSVNPDV LALAEAFADA CKPVGLICIS PALAAKIYGP GVVCTIGRDA GTAAAVEKMG GTHEECDVHD IVEDTQRKLV TTPAYMEAKS ISEAAGGIYK LVDRVLELTH E
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